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Gene : SDG40 A. thaliana

DB identifier  ? AT5G17240 Secondary Identifier  ? locus:2167235
Name  ? SET domain group 40 Brief Description  SET domain group 40
TAIR Computational Description  SET domain group 40;(source:Araport11)
TAIR Curator Summary  NMD epigenetically regulates FLC though SDG40 to modulate flowering time.
TAIR Short Description  SET domain group 40
TAIR Aliases  SDG40

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2085  
Location: Chr5:5666823-5668907

Gene models - SDG40 AT5G17240

? Gene models

Transcripts: 2  Exons: 11  Introns: 9 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SDG40_ARATH similarity Belongs to the class V-like SAM-binding methyltransferase superfamily.

2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
methyltransferase activity  ? ECO  
biological process
methylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets