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Gene : THO7 A. thaliana

DB identifier  ? AT5G16790 Secondary Identifier  ? locus:2149020
Brief Description  Tho complex subunit 7/Mft1p
TAIR Computational Description  Tho complex subunit 7/Mft1p;(source:Araport11)
TAIR Curator Summary  Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.
TAIR Short Description  Tho complex subunit 7/Mft1p
TAIR Aliases  AtTHO7, THO7

0 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1595  
Location: Chr5:5522417-5524011 reverse strand

Gene models - THO7 AT5G16790

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
THO7A_ARATH function Acts as a component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export.
THO7A_ARATH similarity Belongs to the THOC7 family.

1 Proteins

Function

Gene Ontology

cellular component
THO complex  ? ECO  
THO complex part of transcription export complex  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
RNA splicing  ? ECO  
mRNA processing  ? ECO  
mRNA transport  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets