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Gene : AGP6 A. thaliana

DB identifier  ? AT5G14380 Secondary Identifier  ? locus:2145713
Name  ? arabinogalactan protein 6 Brief Description  arabinogalactan protein 6
TAIR Computational Description  arabinogalactan protein 6;(source:Araport11)
TAIR Curator Summary  Encodes an arabinogalactan protein that is expressed in pollen, pollen sac and pollen tube. Loss of AGP6 function results in decreased fertility due to defects in pollen tube growth.
TAIR Short Description  arabinogalactan protein 6
TAIR Aliases  AGP6

4 Gene Rifs

1 Organism

25 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1033  
Location: Chr5:4635644-4636676 reverse strand

Gene models - AGP6 AT5G14380

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
AGP6_ARATH developmental stage Initially detected in the tapetum and microsporocytes during meiosis. Highest expression during the tetrad stage. After microspores were released from tetrad, slightly detected in the tapetum and microspores.
AGP6_ARATH function Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death (By similarity). Plays an important role during the formation of the nexine layer of the pollen wall (PubMed:25336567).
AGP6_ARATH similarity Belongs to the classical AGP family.
AGP6_ARATH tissue specificity Expressed in the anthers.

1 Proteins

Function

Gene Ontology

cellular component
extracellular matrix  ? ECO  
plasma membrane  ? ECO  
side of membrane  ? ECO  
molecular function
No terms in this category.
biological process
pollen wall assembly  ? ECO  
pollen tube growth  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets