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Gene : AT5G13970 A. thaliana

DB identifier	AT5G13970	Secondary Identifier	locus:2159138
Brief Description	midasin-like protein

TAIR Computational Description	midasin-like protein;(source:Araport11)
TAIR Curator Summary	NULL
TAIR Short Description	NULL

0 Gene Rifs

1 Organism

2 Publications

0 Synonyms

Genomics

Genome feature

Region:	gene	Length:	1674
Location:	Chr5:4506191-4507864 reverse strand

Genes

DB identifier	Secondary Identifier	Symbol	Name	Length	Chromosome Location	Organism . Short Name	TAIR Computational Description	TAIR Curator Summary	TAIR Short Description	TAIR Aliases
AT5G13960	locus:2159133	SUVH4	SU(VAR)3-9 homolog 4	4889	Chr5: 4501362-4506250	A. thaliana	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein;(source:Araport11)	Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.	SU(VAR)3-9 homolog 4	KYP, SDG33, SUVH4

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4 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

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Curated comments from UniProt

Type	Comment	Proteins
A0A5S9Y4B0_ARATH	function	Protein associated with the U5 snRNP, during its maturation and its post-splicing recycling and which is required for spliceosomal tri-snRNP complex assembly in the nucleus. Has a molecular sequestering activity and transiently hinders SNRNP200 binding sites for constitutive splicing factors that intervene later during the assembly of the spliceosome and splicing. Together with its molecular sequestering activity, may also function as a molecular adapter and placeholder, coordinating the assembly of the U5 snRNP and its association with the U4/U6 di-snRNP.
A0A5S9Y4B0_ARATH	similarity	Belongs to the TSSC4 family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus	ECO
cytoplasm	ECO
molecular function
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biological process
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Expression

Data Source:

BAR Webservices

Querying ATTED Service... Data Source: ATTED-II

Homology

0 Homologues

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5 Data Sets

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