help  | faq  | software  | BAR
Hide

Oops!

Error: 403

Gene : AT5G13970 A. thaliana

DB identifier  ? AT5G13970 Secondary Identifier  ? locus:2159138
Brief Description  midasin-like protein
TAIR Computational Description  midasin-like protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  NULL

0 Gene Rifs

1 Organism

2 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1674  
Location: Chr5:4506191-4507864 reverse strand

Gene models - AT5G13970 AT5G13970

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A5S9Y4B0_ARATH function Protein associated with the U5 snRNP, during its maturation and its post-splicing recycling and which is required for spliceosomal tri-snRNP complex assembly in the nucleus. Has a molecular sequestering activity and transiently hinders SNRNP200 binding sites for constitutive splicing factors that intervene later during the assembly of the spliceosome and splicing. Together with its molecular sequestering activity, may also function as a molecular adapter and placeholder, coordinating the assembly of the U5 snRNP and its association with the U4/U6 di-snRNP.
A0A5S9Y4B0_ARATH similarity Belongs to the TSSC4 family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
No terms in this category.
biological process
No terms in this category.

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets