External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 19, Exons: 19, Five Prime UTRs: 2, Gene: 1, mRNAs: 2, Three Prime UTR: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13560:CDS:18 | 388 | Chr5: 4361579-4361966 | Arabidopsis thaliana |
AT5G13560:CDS:17 | 71 | Chr5: 4362051-4362121 | Arabidopsis thaliana |
AT5G13560:CDS:16 | 94 | Chr5: 4362271-4362364 | Arabidopsis thaliana |
AT5G13560:CDS:15 | 68 | Chr5: 4362490-4362557 | Arabidopsis thaliana |
AT5G13560:CDS:14 | 67 | Chr5: 4362635-4362701 | Arabidopsis thaliana |
AT5G13560:CDS:13 | 131 | Chr5: 4362788-4362918 | Arabidopsis thaliana |
AT5G13560:CDS:12 | 108 | Chr5: 4363002-4363109 | Arabidopsis thaliana |
AT5G13560:CDS:11 | 66 | Chr5: 4363323-4363388 | Arabidopsis thaliana |
AT5G13560:CDS:10 | 67 | Chr5: 4363540-4363606 | Arabidopsis thaliana |
AT5G13560:CDS:9 | 77 | Chr5: 4363980-4364056 | Arabidopsis thaliana |
AT5G13560:CDS:8 | 111 | Chr5: 4364249-4364359 | Arabidopsis thaliana |
AT5G13560:CDS:7 | 112 | Chr5: 4364444-4364555 | Arabidopsis thaliana |
AT5G13560:CDS:6 | 74 | Chr5: 4364670-4364743 | Arabidopsis thaliana |
AT5G13560:CDS:5 | 97 | Chr5: 4364850-4364946 | Arabidopsis thaliana |
AT5G13560:CDS:4 | 53 | Chr5: 4365089-4365141 | Arabidopsis thaliana |
AT5G13560:CDS:3 | 96 | Chr5: 4365289-4365384 | Arabidopsis thaliana |
AT5G13560:CDS:2 | 210 | Chr5: 4365781-4365990 | Arabidopsis thaliana |
AT5G13560:CDS:1 | 150 | Chr5: 4366169-4366318 | Arabidopsis thaliana |
AT5G13565:CDS:1 | 87 | Chr5: 4361085-4361171 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13560:exon:18 | 1601 | Chr5: 4360366-4361966 | Arabidopsis thaliana |
AT5G13560:exon:17 | 71 | Chr5: 4362051-4362121 | Arabidopsis thaliana |
AT5G13560:exon:16 | 94 | Chr5: 4362271-4362364 | Arabidopsis thaliana |
AT5G13560:exon:15 | 68 | Chr5: 4362490-4362557 | Arabidopsis thaliana |
AT5G13560:exon:14 | 67 | Chr5: 4362635-4362701 | Arabidopsis thaliana |
AT5G13560:exon:13 | 131 | Chr5: 4362788-4362918 | Arabidopsis thaliana |
AT5G13560:exon:12 | 108 | Chr5: 4363002-4363109 | Arabidopsis thaliana |
AT5G13560:exon:11 | 66 | Chr5: 4363323-4363388 | Arabidopsis thaliana |
AT5G13560:exon:10 | 67 | Chr5: 4363540-4363606 | Arabidopsis thaliana |
AT5G13560:exon:9 | 77 | Chr5: 4363980-4364056 | Arabidopsis thaliana |
AT5G13560:exon:8 | 111 | Chr5: 4364249-4364359 | Arabidopsis thaliana |
AT5G13560:exon:7 | 112 | Chr5: 4364444-4364555 | Arabidopsis thaliana |
AT5G13560:exon:6 | 74 | Chr5: 4364670-4364743 | Arabidopsis thaliana |
AT5G13560:exon:5 | 97 | Chr5: 4364850-4364946 | Arabidopsis thaliana |
AT5G13560:exon:4 | 53 | Chr5: 4365089-4365141 | Arabidopsis thaliana |
AT5G13560:exon:3 | 96 | Chr5: 4365289-4365384 | Arabidopsis thaliana |
AT5G13560:exon:2 | 210 | Chr5: 4365781-4365990 | Arabidopsis thaliana |
AT5G13560:exon:1 | 333 | Chr5: 4366169-4366501 | Arabidopsis thaliana |
AT5G13565:exon:1 | 125 | Chr5: 4361047-4361171 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13560:five_prime_UTR:1 | 183 | Chr5: 4366319-4366501 | Arabidopsis thaliana |
AT5G13565:five_prime_UTR:1 | 38 | Chr5: 4361047-4361084 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G13565 | AT5G13565 | 125 | Chr5: 4361047-4361171 | A. thaliana | hypothetical protein;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G13560.1 | 3436 | Chr5: 4360366-4366501 |
AT5G13565.1 | 125 | Chr5: 4361047-4361171 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G13560:three_prime_UTR:1 | 1213 | Chr5: 4360366-4361578 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE15790 | 771 | Chr5: 4366446-4367216 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE15790:transposon_fragment:1 | 771 | Chr5: 4366446-4367216 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
plastid | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...