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Gene : AT5G12950 A. thaliana

DB identifier  ? AT5G12950 Secondary Identifier  ? locus:2182280
Brief Description  proline-tRNA ligase (DUF1680)
TAIR Computational Description  proline-tRNA ligase (DUF1680);(source:Araport11)
TAIR Curator Summary  GH127 domain comtianing protein that is similar to beta-L- arabinofuranosidases.
TAIR Short Description  Putative glycosyl hydrolase of unknown function (DUF1680)
TAIR Aliases  PAF1

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4541  
Location: Chr5:4092519-4097059

Gene models - AT5G12950 AT5G12950

? Gene models

Transcripts: 1  Exons: 12  Introns: 11 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
plant-type vacuole  ? ECO  
molecular function
ligase activity  ? ECO  
biological process
carbohydrate metabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets