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Gene : NF-YA1 A. thaliana

DB identifier  ? AT5G12840 Secondary Identifier  ? locus:2182245
Name  ? nuclear factor Y, subunit A1 Brief Description  nuclear factor Y, subunit A1
TAIR Computational Description  nuclear factor Y, subunit A1;(source:Araport11)
TAIR Curator Summary  Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.
TAIR Short Description  nuclear factor Y, subunit A1
TAIR Aliases  ATHAP2A, AtNFYA1, EMB2220, HAP2A, NF-YA1, NFYA1

4 Gene Rifs

1 Organism

22 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2979  
Location: Chr5:4050691-4053669 reverse strand

Gene models - NF-YA1 AT5G12840

? Gene models

Transcripts: 5  Exons: 34  Introns: 29 

Overlapping Features

? Genome features that overlap coordinates of this Gene

22 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A7G2FA58_ARATH function Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.
NFYA1_ARATH NFYA1_ARATH-2 function Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
A0A7G2FA58_ARATH NFYA1_ARATH NFYA1_ARATH-2 similarity Belongs to the NFYA/HAP2 subunit family.
NFYA1_ARATH NFYA1_ARATH-2 tissue specificity Ubiquitous.

3 Proteins

Function

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets