External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G12150:CDS:23 | 186 | Chr5: 3924393-3924578 | Arabidopsis thaliana |
AT5G12150:CDS:21 | 117 | Chr5: 3924653-3924769 | Arabidopsis thaliana |
AT5G12150:CDS:20 | 67 | Chr5: 3924866-3924932 | Arabidopsis thaliana |
AT5G12150:CDS:19 | 170 | Chr5: 3925047-3925216 | Arabidopsis thaliana |
AT5G12150:CDS:18 | 111 | Chr5: 3925309-3925419 | Arabidopsis thaliana |
AT5G12150:CDS:17 | 84 | Chr5: 3925533-3925616 | Arabidopsis thaliana |
AT5G12150:CDS:16 | 61 | Chr5: 3925692-3925752 | Arabidopsis thaliana |
AT5G12150:CDS:15 | 50 | Chr5: 3925994-3926043 | Arabidopsis thaliana |
AT5G12150:CDS:14 | 303 | Chr5: 3926482-3926784 | Arabidopsis thaliana |
AT5G12150:CDS:13 | 219 | Chr5: 3927058-3927276 | Arabidopsis thaliana |
AT5G12150:CDS:12 | 241 | Chr5: 3927348-3927588 | Arabidopsis thaliana |
AT5G12150:CDS:11 | 88 | Chr5: 3927790-3927877 | Arabidopsis thaliana |
AT5G12150:CDS:10 | 70 | Chr5: 3927958-3928027 | Arabidopsis thaliana |
AT5G12150:CDS:9 | 56 | Chr5: 3928105-3928160 | Arabidopsis thaliana |
AT5G12150:CDS:8 | 78 | Chr5: 3928323-3928400 | Arabidopsis thaliana |
AT5G12150:CDS:7 | 120 | Chr5: 3928639-3928758 | Arabidopsis thaliana |
AT5G12150:CDS:6 | 145 | Chr5: 3928849-3928993 | Arabidopsis thaliana |
AT5G12150:CDS:5 | 79 | Chr5: 3929095-3929173 | Arabidopsis thaliana |
AT5G12150:CDS:4 | 71 | Chr5: 3929249-3929319 | Arabidopsis thaliana |
AT5G12150:CDS:3 | 77 | Chr5: 3929535-3929611 | Arabidopsis thaliana |
AT5G12150:CDS:2 | 37 | Chr5: 3929710-3929746 | Arabidopsis thaliana |
AT5G12150:CDS:1 | 54 | Chr5: 3930047-3930100 | Arabidopsis thaliana |
AT5G12150:CDS:22 | 138 | Chr5: 3924632-3924769 | Arabidopsis thaliana |
AT5G12150:CDS:20.1 | 67 | Chr5: 3924866-3924932 | Arabidopsis thaliana |
AT5G12150:CDS:19.1 | 170 | Chr5: 3925047-3925216 | Arabidopsis thaliana |
AT5G12150:CDS:18.1 | 111 | Chr5: 3925309-3925419 | Arabidopsis thaliana |
AT5G12150:CDS:17.1 | 84 | Chr5: 3925533-3925616 | Arabidopsis thaliana |
AT5G12150:CDS:16.1 | 61 | Chr5: 3925692-3925752 | Arabidopsis thaliana |
AT5G12150:CDS:15.1 | 50 | Chr5: 3925994-3926043 | Arabidopsis thaliana |
AT5G12150:CDS:14.1 | 303 | Chr5: 3926482-3926784 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G12150:exon:24 | 472 | Chr5: 3924107-3924578 | Arabidopsis thaliana |
AT5G12150:exon:22 | 117 | Chr5: 3924653-3924769 | Arabidopsis thaliana |
AT5G12150:exon:1 | 395 | Chr5: 3930047-3930441 | Arabidopsis thaliana |
AT5G12150:exon:23 | 644 | Chr5: 3924126-3924769 | Arabidopsis thaliana |
AT5G12150:exon:21 | 67 | Chr5: 3924866-3924932 | Arabidopsis thaliana |
AT5G12150:exon:20 | 170 | Chr5: 3925047-3925216 | Arabidopsis thaliana |
AT5G12150:exon:19 | 111 | Chr5: 3925309-3925419 | Arabidopsis thaliana |
AT5G12150:exon:18 | 84 | Chr5: 3925533-3925616 | Arabidopsis thaliana |
AT5G12150:exon:17 | 61 | Chr5: 3925692-3925752 | Arabidopsis thaliana |
AT5G12150:exon:16 | 50 | Chr5: 3925994-3926043 | Arabidopsis thaliana |
AT5G12150:exon:15 | 303 | Chr5: 3926482-3926784 | Arabidopsis thaliana |
AT5G12150:exon:14 | 219 | Chr5: 3927058-3927276 | Arabidopsis thaliana |
AT5G12150:exon:13 | 241 | Chr5: 3927348-3927588 | Arabidopsis thaliana |
AT5G12150:exon:12 | 88 | Chr5: 3927790-3927877 | Arabidopsis thaliana |
AT5G12150:exon:11 | 70 | Chr5: 3927958-3928027 | Arabidopsis thaliana |
AT5G12150:exon:10 | 56 | Chr5: 3928105-3928160 | Arabidopsis thaliana |
AT5G12150:exon:9 | 78 | Chr5: 3928323-3928400 | Arabidopsis thaliana |
AT5G12150:exon:8 | 120 | Chr5: 3928639-3928758 | Arabidopsis thaliana |
AT5G12150:exon:7 | 145 | Chr5: 3928849-3928993 | Arabidopsis thaliana |
AT5G12150:exon:6 | 79 | Chr5: 3929095-3929173 | Arabidopsis thaliana |
AT5G12150:exon:5 | 71 | Chr5: 3929249-3929319 | Arabidopsis thaliana |
AT5G12150:exon:4 | 77 | Chr5: 3929535-3929611 | Arabidopsis thaliana |
AT5G12150:exon:3 | 37 | Chr5: 3929710-3929746 | Arabidopsis thaliana |
AT5G12150:exon:2 | 259 | Chr5: 3930047-3930305 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G12150:five_prime_UTR:1 | 341 | Chr5: 3930101-3930441 | Arabidopsis thaliana |
AT5G12150:five_prime_UTR:2 | 205 | Chr5: 3930101-3930305 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G12150.1 | 3111 | Chr5: 3924107-3930441 |
AT5G12150.2 | 3030 | Chr5: 3924126-3930305 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G12150:three_prime_UTR:2 | 286 | Chr5: 3924107-3924392 | Arabidopsis thaliana |
AT5G12150:three_prime_UTR:1 | 506 | Chr5: 3924126-3924631 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
RGAP6_ARATH | function | Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. |
Function
Gene Ontology
cellular component | |
---|---|
cytoplasm | ECO |
plasma membrane | ECO |
molecular function | |
GTPase activator activity | ECO |
biological process | |
signal transduction | ECO |
cell plate formation involved in plant-type cell wall biogenesis | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...