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Gene : PDE149 A. thaliana

DB identifier  ? AT5G12130 Secondary Identifier  ? locus:2177053
Name  ? PIGMENT DEFECTIVE 149 Brief Description  integral membrane TerC family protein
TAIR Computational Description  integral membrane TerC family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  integral membrane TerC family protein
TAIR Aliases  ATTERC, PDE149

2 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3058  
Location: Chr5:3919428-3922485

Gene models - PDE149 AT5G12130

? Gene models

Transcripts: 2  Exons: 27  Introns: 25 

Overlapping Features

? Genome features that overlap coordinates of this Gene

17 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TERC_ARATH function Integral thylakoid membrane protein that plays a crucial role in thylakoid membrane biogenesis and thylakoid formation in early chloroplast development (PubMed:18429937). Is essential for de novo synthesis of photosystem II (PSII) core proteins and required for efficient insertion of thylakoid membrane proteins, presumably via interaction with ALB3. May assist synthesis of thylakoid membrane proteins at the membrane insertion step (PubMed:24612058).
TERC_ARATH tissue specificity Expressed in roots, rosette and cauline leaves, stems and flowers.

2 Proteins

Function

Gene Ontology

cellular component
chloroplast thylakoid  ? ECO  
chloroplast thylakoid membrane  ? ECO  
molecular function
No terms in this category.
biological process
seedling development  ? ECO  
thylakoid membrane organization  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets