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Gene : AT5G11420 A. thaliana

DB identifier  ? AT5G11420 Secondary Identifier  ? locus:2144206
Brief Description  transmembrane protein, putative (Protein of unknown function, DUF642)
TAIR Computational Description  transmembrane protein, putative (Protein of unknown function, DUF642);(source:Araport11)
TAIR Curator Summary  Encodes a DUF642 cell wall protein.
TAIR Short Description  Protein of unknown function, DUF642

1 Gene Rifs

1 Organism

16 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2865  
Location: Chr5:3644547-3647411

Gene models - AT5G11420 AT5G11420

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
B2DXL_ARATH developmental stage Present in the vascular tissue of radicles from germinating seeds, 6 hours after imbibition (PubMed:25442819). Accumulates in the micropylar endosperm prior to testa rupture (PubMed:25442819).
B2DXL_ARATH function Together with BIIDXI, acts as a positive regulator of PME3 activity during several developmental processes, including seed germination and endosperm (testa) rupture at the micropyle, probably by modulating the pectin status in cell walls.

1 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
extracellular region  ? ECO  
molecular function
No terms in this category.
biological process
positive regulation of seed germination  ? ECO  
regulation of cell wall pectin metabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets