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Gene : ALF4 A. thaliana

DB identifier  ? AT5G11030 Secondary Identifier  ? locus:2184896
Name  ? ABERRANT LATERAL ROOT FORMATION 4 Brief Description  aberrant root formation protein
TAIR Computational Description  aberrant root formation protein;(source:Araport11)
TAIR Curator Summary  alf4-1 mutation blocks initiation of lateral roots as well as callus formation. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus.
TAIR Short Description  aberrant lateral root formation 4
TAIR Aliases  ALF4

3 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4386  
Location: Chr5:3490788-3495173 reverse strand

Gene models - ALF4 AT5G11030

? Gene models

Transcripts: 9  Exons: 106  Introns: 97 

Overlapping Features

? Genome features that overlap coordinates of this Gene

31 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ALF4_ARATH ALF4_ARATH-2 ALF4_ARATH-3 function Required for the initiation of lateral roots independent from auxin signaling. May function in maintaining the pericycle in the mitotically competent state needed for lateral root formation.
ALF4_ARATH ALF4_ARATH-2 ALF4_ARATH-3 tissue specificity Widely expressed. Expressed throughout the root tip, stele and lateral primordia. Also expressed in the shoots.

8 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
ubiquitin-protein transferase inhibitor activity  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets