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Gene : AT5G10630 A. thaliana

DB identifier  ? AT5G10630 Secondary Identifier  ? locus:2142469
Brief Description  Translation elongation factor EF1A/initiation factor IF2gamma family protein
TAIR Computational Description  Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11)
TAIR Curator Summary  Transcripts of this gene are alternatively spliced to encode either HBS1, a decoding factor translational GTPase, or SKI7, a component of the cytosolic RNA exosome.
TAIR Short Description  Translation elongation factor EF1A/initiation factor IF2gamma family protein
TAIR Aliases  HBS1, SKI7

1 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4792  
Location: Chr5:3359832-3364623

Gene models - AT5G10630 AT5G10630

? Gene models

Transcripts: 5  Exons: 56  Introns: 51 

Overlapping Features Displayer

24 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1P8BFE6_ARATH B9DFA5_ARATH F4KI84_ARATH A0A1P8BFF4_ARATH function This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
A0A1P8BFE6_ARATH B9DFA5_ARATH F4KI84_ARATH A0A1P8BFF4_ARATH similarity Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.

4 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
molecular function
translation elongation factor activity  ? ECO  
GTPase activity  ? ECO  
GTP binding  ? ECO  
metal ion binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets