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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G08450:CDS:11 | 111 | Chr5: 2727970-2728080 | Arabidopsis thaliana |
AT5G08450:CDS:10 | 247 | Chr5: 2728174-2728420 | Arabidopsis thaliana |
AT5G08450:CDS:9 | 111 | Chr5: 2728496-2728606 | Arabidopsis thaliana |
AT5G08450:CDS:8 | 68 | Chr5: 2728745-2728812 | Arabidopsis thaliana |
AT5G08450:CDS:7 | 114 | Chr5: 2728949-2729062 | Arabidopsis thaliana |
AT5G08450:CDS:6 | 95 | Chr5: 2729193-2729287 | Arabidopsis thaliana |
AT5G08450:CDS:5 | 99 | Chr5: 2729430-2729528 | Arabidopsis thaliana |
AT5G08450:CDS:4 | 61 | Chr5: 2729612-2729672 | Arabidopsis thaliana |
AT5G08450:CDS:3 | 176 | Chr5: 2729852-2730027 | Arabidopsis thaliana |
AT5G08450:CDS:2 | 8 | Chr5: 2730454-2730461 | Arabidopsis thaliana |
AT5G08450:CDS:1 | 1667 | Chr5: 2730906-2732572 | Arabidopsis thaliana |
AT5G08450:CDS:11.1 | 111 | Chr5: 2727970-2728080 | Arabidopsis thaliana |
AT5G08450:CDS:10.1 | 247 | Chr5: 2728174-2728420 | Arabidopsis thaliana |
AT5G08450:CDS:9.1 | 111 | Chr5: 2728496-2728606 | Arabidopsis thaliana |
AT5G08450:CDS:8.1 | 68 | Chr5: 2728745-2728812 | Arabidopsis thaliana |
AT5G08450:CDS:7.1 | 114 | Chr5: 2728949-2729062 | Arabidopsis thaliana |
AT5G08450:CDS:6.1 | 95 | Chr5: 2729193-2729287 | Arabidopsis thaliana |
AT5G08450:CDS:5.1 | 99 | Chr5: 2729430-2729528 | Arabidopsis thaliana |
AT5G08450:CDS:4.1 | 61 | Chr5: 2729612-2729672 | Arabidopsis thaliana |
AT5G08450:CDS:3.1 | 176 | Chr5: 2729852-2730027 | Arabidopsis thaliana |
AT5G08450:CDS:2.1 | 8 | Chr5: 2730454-2730461 | Arabidopsis thaliana |
AT5G08450:CDS:1.1 | 1667 | Chr5: 2730906-2732572 | Arabidopsis thaliana |
AT5G08450:CDS:11.2 | 111 | Chr5: 2727970-2728080 | Arabidopsis thaliana |
AT5G08450:CDS:10.2 | 247 | Chr5: 2728174-2728420 | Arabidopsis thaliana |
AT5G08450:CDS:9.2 | 111 | Chr5: 2728496-2728606 | Arabidopsis thaliana |
AT5G08450:CDS:8.2 | 68 | Chr5: 2728745-2728812 | Arabidopsis thaliana |
AT5G08450:CDS:7.2 | 114 | Chr5: 2728949-2729062 | Arabidopsis thaliana |
AT5G08450:CDS:6.2 | 95 | Chr5: 2729193-2729287 | Arabidopsis thaliana |
AT5G08450:CDS:5.2 | 99 | Chr5: 2729430-2729528 | Arabidopsis thaliana |
AT5G08450:CDS:4.2 | 61 | Chr5: 2729612-2729672 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G08450:exon:3 | 1737 | Chr5: 2730906-2732642 | Arabidopsis thaliana |
AT5G08450:exon:16 | 468 | Chr5: 2727613-2728080 | Arabidopsis thaliana |
AT5G08450:exon:4 | 1700 | Chr5: 2730906-2732605 | Arabidopsis thaliana |
AT5G08450:exon:1 | 185 | Chr5: 2732741-2732925 | Arabidopsis thaliana |
AT5G08450:exon:15 | 260 | Chr5: 2727821-2728080 | Arabidopsis thaliana |
AT5G08450:exon:14 | 247 | Chr5: 2728174-2728420 | Arabidopsis thaliana |
AT5G08450:exon:13 | 111 | Chr5: 2728496-2728606 | Arabidopsis thaliana |
AT5G08450:exon:12 | 68 | Chr5: 2728745-2728812 | Arabidopsis thaliana |
AT5G08450:exon:11 | 114 | Chr5: 2728949-2729062 | Arabidopsis thaliana |
AT5G08450:exon:10 | 95 | Chr5: 2729193-2729287 | Arabidopsis thaliana |
AT5G08450:exon:9 | 99 | Chr5: 2729430-2729528 | Arabidopsis thaliana |
AT5G08450:exon:8 | 61 | Chr5: 2729612-2729672 | Arabidopsis thaliana |
AT5G08450:exon:7 | 176 | Chr5: 2729852-2730027 | Arabidopsis thaliana |
AT5G08450:exon:6 | 8 | Chr5: 2730454-2730461 | Arabidopsis thaliana |
AT5G08450:exon:5 | 1697 | Chr5: 2730906-2732602 | Arabidopsis thaliana |
AT5G08450:exon:2 | 147 | Chr5: 2732741-2732887 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G08450:five_prime_UTR:3 | 70 | Chr5: 2732573-2732642 | Arabidopsis thaliana |
AT5G08450:five_prime_UTR:4 | 33 | Chr5: 2732573-2732605 | Arabidopsis thaliana |
AT5G08450:five_prime_UTR:1 | 185 | Chr5: 2732741-2732925 | Arabidopsis thaliana |
AT5G08450:five_prime_UTR:5 | 30 | Chr5: 2732573-2732602 | Arabidopsis thaliana |
AT5G08450:five_prime_UTR:2 | 147 | Chr5: 2732741-2732887 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G08450.2 | 3369 | Chr5: 2727613-2732925 |
AT5G08450.1 | 3332 | Chr5: 2727613-2732925 |
AT5G08450.3 | 3083 | Chr5: 2727821-2732887 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G08450:three_prime_UTR:2 | 357 | Chr5: 2727613-2727969 | Arabidopsis thaliana |
AT5G08450:three_prime_UTR:1 | 149 | Chr5: 2727821-2727969 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
No terms in this category. | |
biological process | |
developmental vegetative growth | ECO |
response to abscisic acid | ECO |
response to salt | ECO |
seed germination | ECO |
flower development | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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