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Gene : AT5G08050 A. thaliana

DB identifier  ? AT5G08050 Secondary Identifier  ? locus:2142848
Brief Description  wiskott-aldrich syndrome family protein, putative (DUF1118)
TAIR Computational Description  wiskott-aldrich syndrome family protein, putative (DUF1118);(source:Araport11)
TAIR Curator Summary  Encodes a grana core localized protein. Mutant plants have reduced NPQ, affected organization of light-havesting complex II and an enhanced grana stacking.
TAIR Short Description  Protein of unknown function (DUF1118)
TAIR Aliases  RIQ1

0 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 995  
Location: Chr5:2578211-2579205

Gene models - AT5G08050 AT5G08050

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
granal stacked thylakoid  ? ECO  
chloroplast thylakoid  ? ECO  
plasma membrane  ? ECO  
thylakoid  ? ECO  
chloroplast thylakoid membrane  ? ECO  
chloroplast  ? ECO  
molecular function
No terms in this category.
biological process
thylakoid membrane organization  ? ECO  
positive regulation of DNA-templated transcription  ? ECO  
chloroplast organization  ? ECO  
nonphotochemical quenching  ? ECO  
granum assembly  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets