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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07580:CDS:1 | 624 | Chr5: 2399726-2400349 | Arabidopsis thaliana |
AT5G07590:CDS:7 | 368 | Chr5: 2401712-2402079 | Arabidopsis thaliana |
AT5G07590:CDS:6 | 108 | Chr5: 2402191-2402298 | Arabidopsis thaliana |
AT5G07590:CDS:5 | 73 | Chr5: 2402396-2402468 | Arabidopsis thaliana |
AT5G07590:CDS:4 | 222 | Chr5: 2402555-2402776 | Arabidopsis thaliana |
AT5G07590:CDS:2 | 489 | Chr5: 2402879-2403367 | Arabidopsis thaliana |
AT5G07590:CDS:1 | 117 | Chr5: 2403615-2403731 | Arabidopsis thaliana |
AT5G07590:CDS:7.1 | 368 | Chr5: 2401712-2402079 | Arabidopsis thaliana |
AT5G07590:CDS:6.1 | 108 | Chr5: 2402191-2402298 | Arabidopsis thaliana |
AT5G07590:CDS:5.1 | 73 | Chr5: 2402396-2402468 | Arabidopsis thaliana |
AT5G07590:CDS:4.1 | 222 | Chr5: 2402555-2402776 | Arabidopsis thaliana |
AT5G07590:CDS:2.1 | 489 | Chr5: 2402879-2403367 | Arabidopsis thaliana |
AT5G07590:CDS:1.1 | 117 | Chr5: 2403615-2403731 | Arabidopsis thaliana |
AT5G07590:CDS:7.2 | 368 | Chr5: 2401712-2402079 | Arabidopsis thaliana |
AT5G07590:CDS:6.2 | 108 | Chr5: 2402191-2402298 | Arabidopsis thaliana |
AT5G07590:CDS:5.2 | 73 | Chr5: 2402396-2402468 | Arabidopsis thaliana |
AT5G07590:CDS:4.2 | 222 | Chr5: 2402555-2402776 | Arabidopsis thaliana |
AT5G07590:CDS:2.2 | 489 | Chr5: 2402879-2403367 | Arabidopsis thaliana |
AT5G07590:CDS:1.2 | 117 | Chr5: 2403615-2403731 | Arabidopsis thaliana |
AT5G07590:CDS:7.3 | 368 | Chr5: 2401712-2402079 | Arabidopsis thaliana |
AT5G07590:CDS:6.3 | 108 | Chr5: 2402191-2402298 | Arabidopsis thaliana |
AT5G07590:CDS:5.3 | 73 | Chr5: 2402396-2402468 | Arabidopsis thaliana |
AT5G07590:CDS:4.3 | 222 | Chr5: 2402555-2402776 | Arabidopsis thaliana |
AT5G07590:CDS:3 | 396 | Chr5: 2402879-2403274 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07580:exon:1 | 624 | Chr5: 2399726-2400349 | Arabidopsis thaliana |
AT5G07590:exon:13 | 21 | Chr5: 2400313-2400333 | Arabidopsis thaliana |
AT5G07590:exon:11 | 89 | Chr5: 2401135-2401223 | Arabidopsis thaliana |
AT5G07590:exon:12 | 130 | Chr5: 2401094-2401223 | Arabidopsis thaliana |
AT5G07590:exon:9 | 620 | Chr5: 2401460-2402079 | Arabidopsis thaliana |
AT5G07590:exon:3 | 263 | Chr5: 2403615-2403877 | Arabidopsis thaliana |
AT5G07590:exon:10 | 816 | Chr5: 2401264-2402079 | Arabidopsis thaliana |
AT5G07590:exon:2 | 282 | Chr5: 2403615-2403896 | Arabidopsis thaliana |
AT5G07590:exon:8 | 501 | Chr5: 2401579-2402079 | Arabidopsis thaliana |
AT5G07590:exon:7 | 108 | Chr5: 2402191-2402298 | Arabidopsis thaliana |
AT5G07590:exon:6 | 73 | Chr5: 2402396-2402468 | Arabidopsis thaliana |
AT5G07590:exon:5 | 222 | Chr5: 2402555-2402776 | Arabidopsis thaliana |
AT5G07590:exon:4 | 489 | Chr5: 2402879-2403367 | Arabidopsis thaliana |
AT5G07590:exon:1 | 177 | Chr5: 2403701-2403877 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07590:five_prime_UTR:2 | 146 | Chr5: 2403732-2403877 | Arabidopsis thaliana |
AT5G07590:five_prime_UTR:1 | 165 | Chr5: 2403732-2403896 | Arabidopsis thaliana |
AT5G07590:five_prime_UTR:4 | 93 | Chr5: 2403275-2403367 | Arabidopsis thaliana |
AT5G07590:five_prime_UTR:3 | 177 | Chr5: 2403701-2403877 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G07580 | locus:2160304 | AT5G07580 | 624 | Chr5: 2399726-2400349 | A. thaliana | ethylene-responsive transcription factor;(source:Araport11) | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. | Integrase-type DNA-binding superfamily protein | DEWAX2, ERF106 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G07580.1 | 624 | Chr5: 2399726-2400349 |
AT5G07590.1 | 1885 | Chr5: 2400313-2403877 |
AT5G07590.2 | 1905 | Chr5: 2401094-2403877 |
AT5G07590.3 | 1990 | Chr5: 2401264-2403896 |
AT5G07590.4 | 1570 | Chr5: 2401579-2403877 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07590:three_prime_UTR:6 | 21 | Chr5: 2400313-2400333 | Arabidopsis thaliana |
AT5G07590:three_prime_UTR:4 | 89 | Chr5: 2401135-2401223 | Arabidopsis thaliana |
AT5G07590:three_prime_UTR:5 | 130 | Chr5: 2401094-2401223 | Arabidopsis thaliana |
AT5G07590:three_prime_UTR:2 | 252 | Chr5: 2401460-2401711 | Arabidopsis thaliana |
AT5G07590:three_prime_UTR:3 | 448 | Chr5: 2401264-2401711 | Arabidopsis thaliana |
AT5G07590:three_prime_UTR:1 | 133 | Chr5: 2401579-2401711 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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