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Gene : PGIP1 A. thaliana

DB identifier  ? AT5G06860 Secondary Identifier  ? locus:2169389
Name  ? polygalacturonase inhibiting protein 1 Brief Description  polygalacturonase inhibiting protein 1
TAIR Computational Description  polygalacturonase inhibiting protein 1;(source:Araport11)
TAIR Curator Summary  Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection. Suppressed in the proton sensitive stop1-mutant, but the transcription level was recovered by transformation of STOP2. Knockout mutant showed severe damage in the root tip in low Ca and low pH medium.
TAIR Short Description  polygalacturonase inhibiting protein 1
TAIR Aliases  ATPGIP1, PGIP1

2 Gene Rifs

1 Organism

33 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1238  
Location: Chr5:2132350-2133587

Gene models - PGIP1 AT5G06860

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PGIP1_ARATH function Inhibitor of fungal polygalacturonase. It is an important factor for plant resistance to phytopathogenic fungi.
PGIP1_ARATH similarity Belongs to the polygalacturonase-inhibiting protein family.

1 Proteins

Function

Gene Ontology

cellular component
plasmodesma  ? ECO  
Golgi apparatus  ? ECO  
plant-type cell wall  ? ECO  
secretory vesicle  ? ECO  
membrane  ? ECO  
extracellular region  ? ECO  
molecular function
polygalacturonase inhibitor activity  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets