External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
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- pep2pro
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- PIR
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06440:CDS:15 | 630 | Chr5: 1964641-1965270 | Arabidopsis thaliana |
AT5G06440:CDS:13 | 103 | Chr5: 1965359-1965461 | Arabidopsis thaliana |
AT5G06440:CDS:12 | 131 | Chr5: 1965544-1965674 | Arabidopsis thaliana |
AT5G06440:CDS:10 | 100 | Chr5: 1965757-1965856 | Arabidopsis thaliana |
AT5G06440:CDS:8 | 90 | Chr5: 1965952-1966041 | Arabidopsis thaliana |
AT5G06440:CDS:7 | 40 | Chr5: 1966119-1966158 | Arabidopsis thaliana |
AT5G06440:CDS:4 | 123 | Chr5: 1966256-1966378 | Arabidopsis thaliana |
AT5G06440:CDS:3 | 1 | Chr5: 1966475-1966475 | Arabidopsis thaliana |
AT5G06440:CDS:15.1 | 630 | Chr5: 1964641-1965270 | Arabidopsis thaliana |
AT5G06440:CDS:13.1 | 103 | Chr5: 1965359-1965461 | Arabidopsis thaliana |
AT5G06440:CDS:12.1 | 131 | Chr5: 1965544-1965674 | Arabidopsis thaliana |
AT5G06440:CDS:10.1 | 100 | Chr5: 1965757-1965856 | Arabidopsis thaliana |
AT5G06440:CDS:8.1 | 90 | Chr5: 1965952-1966041 | Arabidopsis thaliana |
AT5G06440:CDS:7.1 | 40 | Chr5: 1966119-1966158 | Arabidopsis thaliana |
AT5G06440:CDS:5 | 109 | Chr5: 1966256-1966364 | Arabidopsis thaliana |
AT5G06440:CDS:2 | 122 | Chr5: 1966475-1966596 | Arabidopsis thaliana |
AT5G06440:CDS:1 | 115 | Chr5: 1966693-1966807 | Arabidopsis thaliana |
AT5G06440:CDS:15.2 | 630 | Chr5: 1964641-1965270 | Arabidopsis thaliana |
AT5G06440:CDS:13.2 | 103 | Chr5: 1965359-1965461 | Arabidopsis thaliana |
AT5G06440:CDS:12.2 | 131 | Chr5: 1965544-1965674 | Arabidopsis thaliana |
AT5G06440:CDS:10.2 | 100 | Chr5: 1965757-1965856 | Arabidopsis thaliana |
AT5G06440:CDS:8.2 | 90 | Chr5: 1965952-1966041 | Arabidopsis thaliana |
AT5G06440:CDS:7.2 | 40 | Chr5: 1966119-1966158 | Arabidopsis thaliana |
AT5G06440:CDS:5.1 | 109 | Chr5: 1966256-1966364 | Arabidopsis thaliana |
AT5G06440:CDS:2.1 | 122 | Chr5: 1966475-1966596 | Arabidopsis thaliana |
AT5G06440:CDS:1.1 | 115 | Chr5: 1966693-1966807 | Arabidopsis thaliana |
AT5G06440:CDS:15.3 | 630 | Chr5: 1964641-1965270 | Arabidopsis thaliana |
AT5G06440:CDS:13.3 | 103 | Chr5: 1965359-1965461 | Arabidopsis thaliana |
AT5G06440:CDS:12.3 | 131 | Chr5: 1965544-1965674 | Arabidopsis thaliana |
AT5G06440:CDS:10.3 | 100 | Chr5: 1965757-1965856 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06430:exon:1 | 648 | Chr5: 1963820-1964467 | Arabidopsis thaliana |
AT5G06440:exon:8 | 123 | Chr5: 1966256-1966378 | Arabidopsis thaliana |
AT5G06440:exon:21 | 851 | Chr5: 1964420-1965270 | Arabidopsis thaliana |
AT5G06440:exon:2 | 511 | Chr5: 1966960-1967470 | Arabidopsis thaliana |
AT5G06440:exon:20 | 815 | Chr5: 1964456-1965270 | Arabidopsis thaliana |
AT5G06440:exon:4 | 268 | Chr5: 1966693-1966960 | Arabidopsis thaliana |
AT5G06440:exon:19 | 792 | Chr5: 1964479-1965270 | Arabidopsis thaliana |
AT5G06440:exon:7 | 341 | Chr5: 1966256-1966596 | Arabidopsis thaliana |
AT5G06440:exon:18 | 983 | Chr5: 1964479-1965461 | Arabidopsis thaliana |
AT5G06440:exon:13 | 100 | Chr5: 1965757-1965856 | Arabidopsis thaliana |
AT5G06440:exon:11 | 90 | Chr5: 1965952-1966041 | Arabidopsis thaliana |
AT5G06440:exon:1 | 541 | Chr5: 1966960-1967500 | Arabidopsis thaliana |
AT5G06440:exon:17 | 670 | Chr5: 1964601-1965270 | Arabidopsis thaliana |
AT5G06440:exon:16 | 103 | Chr5: 1965359-1965461 | Arabidopsis thaliana |
AT5G06440:exon:15 | 131 | Chr5: 1965544-1965674 | Arabidopsis thaliana |
AT5G06440:exon:14 | 93 | Chr5: 1965757-1965849 | Arabidopsis thaliana |
AT5G06440:exon:12 | 118 | Chr5: 1965924-1966041 | Arabidopsis thaliana |
AT5G06440:exon:10 | 40 | Chr5: 1966119-1966158 | Arabidopsis thaliana |
AT5G06440:exon:9 | 109 | Chr5: 1966256-1966364 | Arabidopsis thaliana |
AT5G06440:exon:6 | 122 | Chr5: 1966475-1966596 | Arabidopsis thaliana |
AT5G06440:exon:5 | 131 | Chr5: 1966693-1966823 | Arabidopsis thaliana |
AT5G06440:exon:3 | 376 | Chr5: 1966960-1967335 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06430:five_prime_UTR:1 | 216 | Chr5: 1964252-1964467 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:7 | 121 | Chr5: 1966476-1966596 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:2 | 511 | Chr5: 1966960-1967470 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:4 | 153 | Chr5: 1966808-1966960 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:8 | 262 | Chr5: 1966335-1966596 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:6 | 131 | Chr5: 1966693-1966823 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:1 | 541 | Chr5: 1966960-1967500 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:5 | 16 | Chr5: 1966808-1966823 | Arabidopsis thaliana |
AT5G06440:five_prime_UTR:3 | 376 | Chr5: 1966960-1967335 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G06430 | locus:2164325 | AT5G06430 | 1396 | Chr5: 1963072-1964467 | A. thaliana | Thioredoxin superfamily protein;(source:Araport11) | NULL | Thioredoxin superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G06430.1 | 1309 | Chr5: 1963072-1964467 |
AT5G06440.5 | 2202 | Chr5: 1964420-1967470 |
AT5G06440.2 | 2188 | Chr5: 1964420-1967470 |
AT5G06440.3 | 1778 | Chr5: 1964456-1966960 |
AT5G06440.6 | 2269 | Chr5: 1964479-1967500 |
AT5G06440.1 | 2247 | Chr5: 1964479-1967500 |
AT5G06440.4 | 1893 | Chr5: 1964601-1967335 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06440:three_prime_UTR:5 | 221 | Chr5: 1964420-1964640 | Arabidopsis thaliana |
AT5G06440:three_prime_UTR:4 | 185 | Chr5: 1964456-1964640 | Arabidopsis thaliana |
AT5G06440:three_prime_UTR:3 | 162 | Chr5: 1964479-1964640 | Arabidopsis thaliana |
AT5G06440:three_prime_UTR:2 | 772 | Chr5: 1964479-1965250 | Arabidopsis thaliana |
AT5G06440:three_prime_UTR:1 | 40 | Chr5: 1964601-1964640 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...