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Gene : AT5G06270 A. thaliana

DB identifier  ? AT5G06270 Secondary Identifier  ? locus:2164235
Brief Description  hypothetical protein
TAIR Computational Description  hypothetical protein;(source:Araport11)
TAIR Curator Summary  One of two plant specific paralogs of unknown function. Interacts with GL2. GIR1/GIR2 loss of function resembles gl2 lof mutations
TAIR Short Description  NULL
TAIR Aliases  GIR1

1 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1716  
Location: Chr5:1912013-1913728

Gene models - AT5G06270 AT5G06270

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GIR1_ARATH function Acts as a negative regulator of root hair development redundantly with GIR2 (PubMed:28526410). GIR1 and GIR2 may function as adapter proteins that associate with GL2 and participate in the control of root hair formation (PubMed:28526410). GIR1 and GIR2 may function as adapter proteins that associate with TPL and participate in the repression of root gene expression (PubMed:28526412).
GIR1_ARATH tissue specificity Expressed in root and shoot meristems.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
No terms in this category.
biological process
root hair cell development  ? ECO  
negative regulation of DNA-templated transcription  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets