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Gene : CASP4 A. thaliana

DB identifier  ? AT5G06200 Secondary Identifier  ? locus:2160747
Name  ? Casparian strip membrane domain protein 4 Brief Description  Uncharacterized protein family (UPF0497)
TAIR Computational Description  Uncharacterized protein family (UPF0497);(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Uncharacterised protein family (UPF0497)
TAIR Aliases  CASP4

1 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1191  
Location: Chr5:1877134-1878324

Gene models - CASP4 AT5G06200

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CASP4_ARATH function Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.
CASP4_ARATH similarity Belongs to the Casparian strip membrane proteins (CASP) family.
CASP4_ARATH subcellular location Very restricted localization following a belt shape within the plasma membrane which coincides with the position of the Casparian strip membrane domain.

1 Proteins

Function

Gene Ontology

cellular component
Casparian strip  ? ECO  
plasma membrane  ? ECO  
molecular function
protein homodimerization activity  ? ECO  
biological process
cell-cell junction assembly  ? ECO  
cell wall modification  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets