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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06120:CDS:3 | 241 | Chr5: 1845309-1845549 | Arabidopsis thaliana |
AT5G06120:CDS:4 | 161 | Chr5: 1845646-1845806 | Arabidopsis thaliana |
AT5G06120:CDS:5 | 66 | Chr5: 1845922-1845987 | Arabidopsis thaliana |
AT5G06120:CDS:6 | 118 | Chr5: 1846455-1846572 | Arabidopsis thaliana |
AT5G06120:CDS:7 | 110 | Chr5: 1846781-1846890 | Arabidopsis thaliana |
AT5G06120:CDS:8 | 96 | Chr5: 1847003-1847098 | Arabidopsis thaliana |
AT5G06120:CDS:9 | 124 | Chr5: 1847353-1847476 | Arabidopsis thaliana |
AT5G06120:CDS:10 | 68 | Chr5: 1847726-1847793 | Arabidopsis thaliana |
AT5G06120:CDS:11 | 87 | Chr5: 1848070-1848156 | Arabidopsis thaliana |
AT5G06120:CDS:12 | 153 | Chr5: 1848322-1848474 | Arabidopsis thaliana |
AT5G06120:CDS:13 | 96 | Chr5: 1848562-1848657 | Arabidopsis thaliana |
AT5G06120:CDS:14 | 60 | Chr5: 1848780-1848839 | Arabidopsis thaliana |
AT5G06120:CDS:15 | 119 | Chr5: 1848934-1849052 | Arabidopsis thaliana |
AT5G06120:CDS:16 | 88 | Chr5: 1849146-1849233 | Arabidopsis thaliana |
AT5G06120:CDS:17 | 105 | Chr5: 1849535-1849639 | Arabidopsis thaliana |
AT5G06120:CDS:18 | 105 | Chr5: 1849715-1849819 | Arabidopsis thaliana |
AT5G06120:CDS:20 | 53 | Chr5: 1849908-1849960 | Arabidopsis thaliana |
AT5G06120:CDS:21 | 64 | Chr5: 1850054-1850117 | Arabidopsis thaliana |
AT5G06120:CDS:22 | 135 | Chr5: 1850213-1850347 | Arabidopsis thaliana |
AT5G06120:CDS:23 | 113 | Chr5: 1850571-1850683 | Arabidopsis thaliana |
AT5G06120:CDS:24 | 94 | Chr5: 1850767-1850860 | Arabidopsis thaliana |
AT5G06120:CDS:25 | 220 | Chr5: 1851041-1851260 | Arabidopsis thaliana |
AT5G06120:CDS:26 | 131 | Chr5: 1851351-1851481 | Arabidopsis thaliana |
AT5G06120:CDS:27 | 147 | Chr5: 1851646-1851792 | Arabidopsis thaliana |
AT5G06120:CDS:28 | 129 | Chr5: 1851917-1852045 | Arabidopsis thaliana |
AT5G06120:CDS:29 | 99 | Chr5: 1852139-1852237 | Arabidopsis thaliana |
AT5G06120:CDS:30 | 39 | Chr5: 1852336-1852374 | Arabidopsis thaliana |
AT5G06120:CDS:32 | 138 | Chr5: 1852464-1852601 | Arabidopsis thaliana |
AT5G06120:CDS:3.1 | 241 | Chr5: 1845309-1845549 | Arabidopsis thaliana |
AT5G06120:CDS:4.1 | 161 | Chr5: 1845646-1845806 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06110:exon:2 | 245 | Chr5: 1843628-1843872 | Arabidopsis thaliana |
AT5G06110:exon:1 | 229 | Chr5: 1843644-1843872 | Arabidopsis thaliana |
AT5G06120:exon:1 | 357 | Chr5: 1843828-1844184 | Arabidopsis thaliana |
AT5G06120:exon:39 | 540 | Chr5: 1852464-1853003 | Arabidopsis thaliana |
AT5G06120:exon:7 | 88 | Chr5: 1844737-1844824 | Arabidopsis thaliana |
AT5G06120:exon:2 | 248 | Chr5: 1843937-1844184 | Arabidopsis thaliana |
AT5G06120:exon:41 | 588 | Chr5: 1852464-1853051 | Arabidopsis thaliana |
AT5G06120:exon:8 | 813 | Chr5: 1844737-1845549 | Arabidopsis thaliana |
AT5G06120:exon:24 | 105 | Chr5: 1849715-1849819 | Arabidopsis thaliana |
AT5G06120:exon:38 | 533 | Chr5: 1852464-1852996 | Arabidopsis thaliana |
AT5G06120:exon:3 | 203 | Chr5: 1843982-1844184 | Arabidopsis thaliana |
AT5G06120:exon:5 | 30 | Chr5: 1844737-1844766 | Arabidopsis thaliana |
AT5G06120:exon:40 | 575 | Chr5: 1852464-1853038 | Arabidopsis thaliana |
AT5G06120:exon:4 | 107 | Chr5: 1844078-1844184 | Arabidopsis thaliana |
AT5G06120:exon:6 | 67 | Chr5: 1844737-1844803 | Arabidopsis thaliana |
AT5G06120:exon:9 | 258 | Chr5: 1845292-1845549 | Arabidopsis thaliana |
AT5G06120:exon:10 | 161 | Chr5: 1845646-1845806 | Arabidopsis thaliana |
AT5G06120:exon:11 | 66 | Chr5: 1845922-1845987 | Arabidopsis thaliana |
AT5G06120:exon:12 | 118 | Chr5: 1846455-1846572 | Arabidopsis thaliana |
AT5G06120:exon:13 | 110 | Chr5: 1846781-1846890 | Arabidopsis thaliana |
AT5G06120:exon:14 | 96 | Chr5: 1847003-1847098 | Arabidopsis thaliana |
AT5G06120:exon:15 | 124 | Chr5: 1847353-1847476 | Arabidopsis thaliana |
AT5G06120:exon:16 | 68 | Chr5: 1847726-1847793 | Arabidopsis thaliana |
AT5G06120:exon:17 | 87 | Chr5: 1848070-1848156 | Arabidopsis thaliana |
AT5G06120:exon:18 | 153 | Chr5: 1848322-1848474 | Arabidopsis thaliana |
AT5G06120:exon:19 | 96 | Chr5: 1848562-1848657 | Arabidopsis thaliana |
AT5G06120:exon:20 | 60 | Chr5: 1848780-1848839 | Arabidopsis thaliana |
AT5G06120:exon:21 | 119 | Chr5: 1848934-1849052 | Arabidopsis thaliana |
AT5G06120:exon:22 | 88 | Chr5: 1849146-1849233 | Arabidopsis thaliana |
AT5G06120:exon:23 | 105 | Chr5: 1849535-1849639 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06110:five_prime_UTR:2 | 245 | Chr5: 1843628-1843872 | Arabidopsis thaliana |
AT5G06110:five_prime_UTR:1 | 229 | Chr5: 1843644-1843872 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:1 | 357 | Chr5: 1843828-1844184 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:7 | 88 | Chr5: 1844737-1844824 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:2 | 248 | Chr5: 1843937-1844184 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:8 | 572 | Chr5: 1844737-1845308 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:3 | 203 | Chr5: 1843982-1844184 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:5 | 30 | Chr5: 1844737-1844766 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:9 | 17 | Chr5: 1845292-1845308 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:4 | 107 | Chr5: 1844078-1844184 | Arabidopsis thaliana |
AT5G06120:five_prime_UTR:6 | 60 | Chr5: 1844737-1844796 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G06110 | locus:2152835 | AT5G06110 | 3118 | Chr5: 1840755-1843872 | A. thaliana | DnaJ and myb-like DNA-binding domain-containing protein;(source:Araport11) | Encodes a ZRF1 chromatin regulator. Functions in regulating plant growth and development. | DnaJ domain ;Myb-like DNA-binding domain | AtGlsA1, AtGlsA2, ZRF1b |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G06110.1 | 2554 | Chr5: 1840755-1843872 |
AT5G06110.2 | 2464 | Chr5: 1840829-1843872 |
AT5G06120.6 | 3965 | Chr5: 1843828-1853003 |
AT5G06120.3 | 3935 | Chr5: 1843828-1853003 |
AT5G06120.5 | 4002 | Chr5: 1843828-1853003 |
AT5G06120.8 | 3959 | Chr5: 1843937-1853051 |
AT5G06120.4 | 3938 | Chr5: 1843937-1853051 |
AT5G06120.7 | 4426 | Chr5: 1843937-1853051 |
AT5G06120.9 | 3871 | Chr5: 1843937-1853051 |
AT5G06120.2 | 4329 | Chr5: 1843982-1852996 |
AT5G06120.10 | 3843 | Chr5: 1843982-1853038 |
AT5G06120.1 | 3368 | Chr5: 1844078-1852601 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G06120:three_prime_UTR:2 | 402 | Chr5: 1852602-1853003 | Arabidopsis thaliana |
AT5G06120:three_prime_UTR:4 | 450 | Chr5: 1852602-1853051 | Arabidopsis thaliana |
AT5G06120:three_prime_UTR:1 | 395 | Chr5: 1852602-1852996 | Arabidopsis thaliana |
AT5G06120:three_prime_UTR:3 | 437 | Chr5: 1852602-1853038 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8BC50_ARATH A0A384KE19_ARATH F4K2C1_ARATH A0A1P8BC62_ARATH F4K2C2_ARATH | similarity | Belongs to the exportin family. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
small GTPase binding | ECO |
nuclear export signal receptor activity | ECO |
biological process | |
intracellular protein transport | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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