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Gene : PIRL1 A. thaliana

DB identifier  ? AT5G05850 Secondary Identifier  ? locus:2166429
Name  ? plant intracellular ras group-related LRR 1 Brief Description  plant intracellular ras group-related LRR 1
TAIR Computational Description  plant intracellular ras group-related LRR 1;(source:Araport11)
TAIR Curator Summary  Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen.
TAIR Short Description  plant intracellular ras group-related LRR 1
TAIR Aliases  PIRL1

1 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2370  
Location: Chr5:1762405-1764774 reverse strand

Gene models - PIRL1 AT5G05850

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PIRL1_ARATH function Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. PIRL1 acts redundantly with PIRL9 in the differentiation of microspores into pollen.
PIRL1_ARATH similarity Belongs to the SHOC2 family.
PIRL1_ARATH tissue specificity Widely expressed.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
No terms in this category.
biological process
pollen development  ? ECO  
microgametogenesis  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets