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Gene : RPN8A A. thaliana

DB identifier  ? AT5G05780 Secondary Identifier  ? locus:2166449
Name  ? RP non-ATPase subunit 8A Brief Description  RP non-ATPase subunit 8A
TAIR Computational Description  RP non-ATPase subunit 8A;(source:Araport11)
TAIR Curator Summary  Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity. The mRNA is cell-to-cell mobile.
TAIR Short Description  RP non-ATPase subunit 8A
TAIR Aliases  AE3, ATHMOV34, RPN8A

0 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3016  
Location: Chr5:1735725-1738740

Gene models - RPN8A AT5G05780

? Gene models

Transcripts: 2  Exons: 20  Introns: 18 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PSD7A_ARATH function Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins (By similarity). Required for innate immunity.
PSD7A_ARATH F4K0U3_ARATH similarity Belongs to the peptidase M67A family.
PSD7A_ARATH tissue specificity Ubiquitous with highest expression in flowers.

2 Proteins

Function

Gene Ontology

cellular component
proteasome regulatory particle  ? ECO  
plasma membrane  ? ECO  
proteasome complex  ? ECO  
molecular function
metallopeptidase activity  ? ECO  
biological process
leaf morphogenesis  ? ECO  
innate immune response  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets