External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G05435.1 | 1248 | Chr5: 1606377-1607704 |
AT5G05435.2 | 876 | Chr5: 1606378-1607673 |
AT5G05435.3 | 775 | Chr5: 1606378-1607673 |
AT5G05435.4 | 979 | Chr5: 1606378-1607673 |
AT5G05435.5 | 1141 | Chr5: 1606381-1607704 |
AT5G05435.6 | 1016 | Chr5: 1606383-1607738 |
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05430:CDS:6 | 154 | Chr5: 1605275-1605428 | Arabidopsis thaliana |
AT5G05430:CDS:4 | 264 | Chr5: 1605734-1605997 | Arabidopsis thaliana |
AT5G05430:CDS:3 | 32 | Chr5: 1606074-1606105 | Arabidopsis thaliana |
AT5G05430:CDS:2 | 18 | Chr5: 1606253-1606270 | Arabidopsis thaliana |
AT5G05430:CDS:6.1 | 154 | Chr5: 1605275-1605428 | Arabidopsis thaliana |
AT5G05430:CDS:5 | 123 | Chr5: 1605530-1605652 | Arabidopsis thaliana |
AT5G05430:CDS:4.1 | 264 | Chr5: 1605734-1605997 | Arabidopsis thaliana |
AT5G05430:CDS:3.1 | 32 | Chr5: 1606074-1606105 | Arabidopsis thaliana |
AT5G05430:CDS:2.1 | 18 | Chr5: 1606253-1606270 | Arabidopsis thaliana |
AT5G05430:CDS:6.2 | 154 | Chr5: 1605275-1605428 | Arabidopsis thaliana |
AT5G05430:CDS:4.2 | 264 | Chr5: 1605734-1605997 | Arabidopsis thaliana |
AT5G05430:CDS:1 | 68 | Chr5: 1606645-1606712 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05430:exon:3 | 42 | Chr5: 1606253-1606294 | Arabidopsis thaliana |
AT5G05430:exon:6 | 123 | Chr5: 1605530-1605652 | Arabidopsis thaliana |
AT5G05430:exon:4 | 32 | Chr5: 1606074-1606105 | Arabidopsis thaliana |
AT5G05430:exon:2 | 47 | Chr5: 1606253-1606299 | Arabidopsis thaliana |
AT5G05430:exon:7 | 154 | Chr5: 1605275-1605428 | Arabidopsis thaliana |
AT5G05430:exon:5 | 264 | Chr5: 1605734-1605997 | Arabidopsis thaliana |
AT5G05430:exon:1 | 68 | Chr5: 1606645-1606712 | Arabidopsis thaliana |
AT5G05435:exon:1 | 684 | Chr5: 1606377-1607060 | Arabidopsis thaliana |
AT5G05435:exon:2 | 345 | Chr5: 1606378-1606722 | Arabidopsis thaliana |
AT5G05435:exon:3 | 680 | Chr5: 1606381-1607060 | Arabidopsis thaliana |
AT5G05435:exon:4 | 340 | Chr5: 1606383-1606722 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05430:five_prime_UTR:2 | 24 | Chr5: 1606271-1606294 | Arabidopsis thaliana |
AT5G05430:five_prime_UTR:1 | 29 | Chr5: 1606271-1606299 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G05435 | locus:4010713946 | AT5G05435 | 1362 | Chr5: 1606377-1607738 | A. thaliana | Natural antisense transcript overlaps with AT5G05430;(source:Araport11) | NULL | other RNA |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G05430.3 | 492 | Chr5: 1605275-1606294 |
AT5G05430.2 | 620 | Chr5: 1605275-1606299 |
AT5G05430.1 | 486 | Chr5: 1605275-1606712 |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...