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Gene : AT5G05130 A. thaliana

DB identifier  ? AT5G05130 Secondary Identifier  ? locus:2175324
Brief Description  DNA/RNA helicase protein
TAIR Computational Description  DNA/RNA helicase protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  DNA/RNA helicase protein

0 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3085  
Location: Chr5:1512082-1515166

Gene models - AT5G05130 AT5G05130

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SM3L1_ARATH function Possesses intrinsic ATP-dependent nucleosome-remodeling activity. This activity may be required for transcriptional activation or repression of specific target promoters (By similarity).
SM3L1_ARATH similarity Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
helicase activity  ? ECO  
ATP-dependent chromatin remodeler activity  ? ECO  
ATP-dependent activity, acting on DNA  ? ECO  
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides  ? ECO  
zinc ion binding  ? ECO  
nucleic acid binding  ? ECO  
ATP binding  ? ECO  
biological process
DNA repair  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


11 Homologues

 

Other

7 Data Sets