External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
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- Plaza
- pep2pro
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04480:CDS:15 | 390 | Chr5: 1271886-1272275 | Arabidopsis thaliana |
AT5G04480:CDS:14 | 82 | Chr5: 1272365-1272446 | Arabidopsis thaliana |
AT5G04480:CDS:13 | 153 | Chr5: 1272527-1272679 | Arabidopsis thaliana |
AT5G04480:CDS:12 | 173 | Chr5: 1272914-1273086 | Arabidopsis thaliana |
AT5G04480:CDS:11 | 189 | Chr5: 1273270-1273458 | Arabidopsis thaliana |
AT5G04480:CDS:10 | 210 | Chr5: 1273561-1273770 | Arabidopsis thaliana |
AT5G04480:CDS:9 | 507 | Chr5: 1273891-1274397 | Arabidopsis thaliana |
AT5G04480:CDS:8 | 204 | Chr5: 1274475-1274678 | Arabidopsis thaliana |
AT5G04480:CDS:7 | 321 | Chr5: 1275047-1275367 | Arabidopsis thaliana |
AT5G04480:CDS:6 | 172 | Chr5: 1275460-1275631 | Arabidopsis thaliana |
AT5G04480:CDS:5 | 51 | Chr5: 1275808-1275858 | Arabidopsis thaliana |
AT5G04480:CDS:4 | 104 | Chr5: 1275997-1276100 | Arabidopsis thaliana |
AT5G04480:CDS:3 | 87 | Chr5: 1276295-1276381 | Arabidopsis thaliana |
AT5G04480:CDS:1 | 510 | Chr5: 1277284-1277793 | Arabidopsis thaliana |
AT5G04480:CDS:15.1 | 390 | Chr5: 1271886-1272275 | Arabidopsis thaliana |
AT5G04480:CDS:14.1 | 82 | Chr5: 1272365-1272446 | Arabidopsis thaliana |
AT5G04480:CDS:13.1 | 153 | Chr5: 1272527-1272679 | Arabidopsis thaliana |
AT5G04480:CDS:12.1 | 173 | Chr5: 1272914-1273086 | Arabidopsis thaliana |
AT5G04480:CDS:11.1 | 189 | Chr5: 1273270-1273458 | Arabidopsis thaliana |
AT5G04480:CDS:10.1 | 210 | Chr5: 1273561-1273770 | Arabidopsis thaliana |
AT5G04480:CDS:9.1 | 507 | Chr5: 1273891-1274397 | Arabidopsis thaliana |
AT5G04480:CDS:8.1 | 204 | Chr5: 1274475-1274678 | Arabidopsis thaliana |
AT5G04480:CDS:7.1 | 321 | Chr5: 1275047-1275367 | Arabidopsis thaliana |
AT5G04480:CDS:6.1 | 172 | Chr5: 1275460-1275631 | Arabidopsis thaliana |
AT5G04480:CDS:5.1 | 51 | Chr5: 1275808-1275858 | Arabidopsis thaliana |
AT5G04480:CDS:4.1 | 104 | Chr5: 1275997-1276100 | Arabidopsis thaliana |
AT5G04480:CDS:2 | 42 | Chr5: 1276340-1276381 | Arabidopsis thaliana |
AT5G04480:CDS:1.1 | 510 | Chr5: 1277284-1277793 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04480:exon:17 | 771 | Chr5: 1271505-1272275 | Arabidopsis thaliana |
AT5G04480:exon:4 | 87 | Chr5: 1276295-1276381 | Arabidopsis thaliana |
AT5G04480:exon:1 | 819 | Chr5: 1277284-1278102 | Arabidopsis thaliana |
AT5G04480:exon:16 | 758 | Chr5: 1271518-1272275 | Arabidopsis thaliana |
AT5G04480:exon:15 | 82 | Chr5: 1272365-1272446 | Arabidopsis thaliana |
AT5G04480:exon:14 | 153 | Chr5: 1272527-1272679 | Arabidopsis thaliana |
AT5G04480:exon:13 | 173 | Chr5: 1272914-1273086 | Arabidopsis thaliana |
AT5G04480:exon:12 | 189 | Chr5: 1273270-1273458 | Arabidopsis thaliana |
AT5G04480:exon:11 | 210 | Chr5: 1273561-1273770 | Arabidopsis thaliana |
AT5G04480:exon:10 | 507 | Chr5: 1273891-1274397 | Arabidopsis thaliana |
AT5G04480:exon:9 | 204 | Chr5: 1274475-1274678 | Arabidopsis thaliana |
AT5G04480:exon:8 | 321 | Chr5: 1275047-1275367 | Arabidopsis thaliana |
AT5G04480:exon:7 | 172 | Chr5: 1275460-1275631 | Arabidopsis thaliana |
AT5G04480:exon:6 | 51 | Chr5: 1275808-1275858 | Arabidopsis thaliana |
AT5G04480:exon:5 | 104 | Chr5: 1275997-1276100 | Arabidopsis thaliana |
AT5G04480:exon:3 | 42 | Chr5: 1276340-1276381 | Arabidopsis thaliana |
AT5G04480:exon:2 | 663 | Chr5: 1277284-1277946 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04480:five_prime_UTR:1 | 309 | Chr5: 1277794-1278102 | Arabidopsis thaliana |
AT5G04480:five_prime_UTR:2 | 153 | Chr5: 1277794-1277946 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G04480.1 | 3843 | Chr5: 1271505-1278102 |
AT5G04480.2 | 3629 | Chr5: 1271518-1277946 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04480:three_prime_UTR:2 | 381 | Chr5: 1271505-1271885 | Arabidopsis thaliana |
AT5G04480:three_prime_UTR:1 | 368 | Chr5: 1271518-1271885 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
trans-Golgi network | ECO |
Golgi apparatus | ECO |
Golgi cis cisterna | ECO |
endosome | ECO |
membrane | ECO |
molecular function | |
transferase activity | ECO |
biological process | |
pollen tube development | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...