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Gene : KDTA A. thaliana

DB identifier  ? AT5G03770 Secondary Identifier  ? locus:2144643
Name  ? KDO transferase A Brief Description  KDO transferase A
TAIR Computational Description  KDO transferase A;(source:Araport11)
TAIR Curator Summary  Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase
TAIR Short Description  KDO transferase A
TAIR Aliases  AtKdtA, KDTA

1 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2755  
Location: Chr5:995095-997849

Gene models - KDTA AT5G03770

? Gene models

Transcripts: 3  Exons: 31  Introns: 28 

Overlapping Features

? Genome features that overlap coordinates of this Gene

17 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
KDTA_ARATH function Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Catalyzes the transfer of two 3-deoxy-D-manno-octulosonate (Kdo) residues from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses.
KDTA_ARATH pathway Glycolipid biosynthesis; KDO(2)-lipid A biosynthesis; KDO(2)-lipid A from CMP-3-deoxy-D-manno-octulosonate and lipid IV(A): step 1/4.
KDTA_ARATH pathway Glycolipid biosynthesis; KDO(2)-lipid A biosynthesis; KDO(2)-lipid A from CMP-3-deoxy-D-manno-octulosonate and lipid IV(A): step 2/4.
KDTA_ARATH similarity Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 30 subfamily.
KDTA_ARATH tissue specificity Expressed in leaves, stems and flowers.

3 Proteins

Function

Gene Ontology

cellular component
mitochondrion  ? ECO  
plasma membrane  ? ECO  
molecular function
Kdo transferase activity  ? ECO  
transferase activity  ? ECO  
biological process
Kdo2-lipid A biosynthetic process  ? ECO  
lipid A biosynthetic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets