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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03180:CDS:9 | 150 | Chr5: 754201-754350 | Arabidopsis thaliana |
AT5G03180:CDS:8 | 92 | Chr5: 754451-754542 | Arabidopsis thaliana |
AT5G03180:CDS:6 | 456 | Chr5: 754626-755081 | Arabidopsis thaliana |
AT5G03180:CDS:5 | 169 | Chr5: 755162-755330 | Arabidopsis thaliana |
AT5G03180:CDS:2 | 456 | Chr5: 755489-755944 | Arabidopsis thaliana |
AT5G03180:CDS:1 | 78 | Chr5: 756334-756411 | Arabidopsis thaliana |
AT5G03180:CDS:9.1 | 150 | Chr5: 754201-754350 | Arabidopsis thaliana |
AT5G03180:CDS:8.1 | 92 | Chr5: 754451-754542 | Arabidopsis thaliana |
AT5G03180:CDS:6.1 | 456 | Chr5: 754626-755081 | Arabidopsis thaliana |
AT5G03180:CDS:5.1 | 169 | Chr5: 755162-755330 | Arabidopsis thaliana |
AT5G03180:CDS:3 | 429 | Chr5: 755489-755917 | Arabidopsis thaliana |
AT5G03180:CDS:9.2 | 150 | Chr5: 754201-754350 | Arabidopsis thaliana |
AT5G03180:CDS:8.2 | 92 | Chr5: 754451-754542 | Arabidopsis thaliana |
AT5G03180:CDS:6.2 | 456 | Chr5: 754626-755081 | Arabidopsis thaliana |
AT5G03180:CDS:4 | 157 | Chr5: 755174-755330 | Arabidopsis thaliana |
AT5G03180:CDS:2.1 | 456 | Chr5: 755489-755944 | Arabidopsis thaliana |
AT5G03180:CDS:1.1 | 78 | Chr5: 756334-756411 | Arabidopsis thaliana |
AT5G03180:CDS:7 | 542 | Chr5: 754540-755081 | Arabidopsis thaliana |
AT5G03180:CDS:5.2 | 169 | Chr5: 755162-755330 | Arabidopsis thaliana |
AT5G03180:CDS:2.2 | 456 | Chr5: 755489-755944 | Arabidopsis thaliana |
AT5G03180:CDS:1.2 | 78 | Chr5: 756334-756411 | Arabidopsis thaliana |
AT5G03180:CDS:7.1 | 542 | Chr5: 754540-755081 | Arabidopsis thaliana |
AT5G03180:CDS:4.1 | 157 | Chr5: 755174-755330 | Arabidopsis thaliana |
AT5G03180:CDS:2.3 | 456 | Chr5: 755489-755944 | Arabidopsis thaliana |
AT5G03180:CDS:1.3 | 78 | Chr5: 756334-756411 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03180:exon:3 | 300 | Chr5: 756334-756633 | Arabidopsis thaliana |
AT5G03180:exon:1 | 293 | Chr5: 756354-756646 | Arabidopsis thaliana |
AT5G03180:exon:9 | 92 | Chr5: 754451-754542 | Arabidopsis thaliana |
AT5G03180:exon:7 | 456 | Chr5: 754626-755081 | Arabidopsis thaliana |
AT5G03180:exon:11 | 511 | Chr5: 753840-754350 | Arabidopsis thaliana |
AT5G03180:exon:6 | 169 | Chr5: 755162-755330 | Arabidopsis thaliana |
AT5G03180:exon:10 | 464 | Chr5: 753887-754350 | Arabidopsis thaliana |
AT5G03180:exon:8 | 631 | Chr5: 754451-755081 | Arabidopsis thaliana |
AT5G03180:exon:5 | 157 | Chr5: 755174-755330 | Arabidopsis thaliana |
AT5G03180:exon:4 | 456 | Chr5: 755489-755944 | Arabidopsis thaliana |
AT5G03180:exon:2 | 313 | Chr5: 756334-756646 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03180:five_prime_UTR:2 | 222 | Chr5: 756412-756633 | Arabidopsis thaliana |
AT5G03180:five_prime_UTR:4 | 27 | Chr5: 755918-755944 | Arabidopsis thaliana |
AT5G03180:five_prime_UTR:3 | 293 | Chr5: 756354-756646 | Arabidopsis thaliana |
AT5G03180:five_prime_UTR:1 | 235 | Chr5: 756412-756646 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G03180.2 | 1984 | Chr5: 753840-756633 |
AT5G03180.4 | 1977 | Chr5: 753840-756646 |
AT5G03180.1 | 1985 | Chr5: 753840-756646 |
AT5G03180.3 | 2080 | Chr5: 753840-756646 |
AT5G03180.5 | 2021 | Chr5: 753887-756646 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G03180:three_prime_UTR:4 | 361 | Chr5: 753840-754200 | Arabidopsis thaliana |
AT5G03180:three_prime_UTR:3 | 511 | Chr5: 753840-754350 | Arabidopsis thaliana |
AT5G03180:three_prime_UTR:2 | 464 | Chr5: 753887-754350 | Arabidopsis thaliana |
AT5G03180:three_prime_UTR:1 | 89 | Chr5: 754451-754539 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
zinc ion binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...