External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02710:CDS:1 | 267 | Chr5: 612628-612894 | Arabidopsis thaliana |
AT5G02710:CDS:2 | 79 | Chr5: 612987-613065 | Arabidopsis thaliana |
AT5G02710:CDS:3 | 88 | Chr5: 613153-613240 | Arabidopsis thaliana |
AT5G02710:CDS:4 | 97 | Chr5: 613384-613480 | Arabidopsis thaliana |
AT5G02710:CDS:1.1 | 267 | Chr5: 612628-612894 | Arabidopsis thaliana |
AT5G02710:CDS:2.1 | 79 | Chr5: 612987-613065 | Arabidopsis thaliana |
AT5G02710:CDS:3.1 | 88 | Chr5: 613153-613240 | Arabidopsis thaliana |
AT5G02710:CDS:4.1 | 97 | Chr5: 613384-613480 | Arabidopsis thaliana |
AT5G02710:CDS:1.2 | 267 | Chr5: 612628-612894 | Arabidopsis thaliana |
AT5G02710:CDS:2.2 | 79 | Chr5: 612987-613065 | Arabidopsis thaliana |
AT5G02710:CDS:3.2 | 88 | Chr5: 613153-613240 | Arabidopsis thaliana |
AT5G02710:CDS:4.2 | 97 | Chr5: 613384-613480 | Arabidopsis thaliana |
AT5G02720:CDS:5 | 236 | Chr5: 613782-614017 | Arabidopsis thaliana |
AT5G02720:CDS:4 | 193 | Chr5: 614121-614313 | Arabidopsis thaliana |
AT5G02720:CDS:5.1 | 236 | Chr5: 613782-614017 | Arabidopsis thaliana |
AT5G02720:CDS:3 | 196 | Chr5: 614121-614316 | Arabidopsis thaliana |
AT5G02720:CDS:2 | 176 | Chr5: 614413-614588 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02710:exon:8 | 475 | Chr5: 614088-614562 | Arabidopsis thaliana |
AT5G02710:exon:1 | 432 | Chr5: 612463-612894 | Arabidopsis thaliana |
AT5G02710:exon:6 | 1179 | Chr5: 613384-614562 | Arabidopsis thaliana |
AT5G02710:exon:2 | 325 | Chr5: 612570-612894 | Arabidopsis thaliana |
AT5G02710:exon:3 | 79 | Chr5: 612987-613065 | Arabidopsis thaliana |
AT5G02710:exon:4 | 88 | Chr5: 613153-613240 | Arabidopsis thaliana |
AT5G02710:exon:5 | 121 | Chr5: 613384-613504 | Arabidopsis thaliana |
AT5G02710:exon:7 | 735 | Chr5: 613793-614527 | Arabidopsis thaliana |
AT5G02720:exon:6 | 536 | Chr5: 613482-614017 | Arabidopsis thaliana |
AT5G02720:exon:4 | 193 | Chr5: 614121-614313 | Arabidopsis thaliana |
AT5G02720:exon:5 | 493 | Chr5: 613525-614017 | Arabidopsis thaliana |
AT5G02720:exon:3 | 196 | Chr5: 614121-614316 | Arabidopsis thaliana |
AT5G02720:exon:2 | 176 | Chr5: 614413-614588 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02710:five_prime_UTR:1 | 165 | Chr5: 612463-612627 | Arabidopsis thaliana |
AT5G02710:five_prime_UTR:2 | 58 | Chr5: 612570-612627 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G02720 | locus:2151196 | AT5G02720 | 1610 | Chr5: 613482-615091 | A. thaliana | valine-tRNA ligase;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G02710.1 | 1195 | Chr5: 612463-614562 |
AT5G02710.2 | 1778 | Chr5: 612463-614562 |
AT5G02710.3 | 1348 | Chr5: 612570-614527 |
AT5G02720.1 | 729 | Chr5: 613482-614313 |
AT5G02720.2 | 987 | Chr5: 613525-615091 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G02710:three_prime_UTR:4 | 475 | Chr5: 614088-614562 | Arabidopsis thaliana |
AT5G02710:three_prime_UTR:2 | 1082 | Chr5: 613481-614562 | Arabidopsis thaliana |
AT5G02710:three_prime_UTR:1 | 24 | Chr5: 613481-613504 | Arabidopsis thaliana |
AT5G02710:three_prime_UTR:3 | 735 | Chr5: 613793-614527 | Arabidopsis thaliana |
AT5G02720:three_prime_UTR:2 | 300 | Chr5: 613482-613781 | Arabidopsis thaliana |
AT5G02720:three_prime_UTR:1 | 257 | Chr5: 613525-613781 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...