help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : OFP1 A. thaliana

DB identifier  ? AT5G01840 Secondary Identifier  ? locus:2180977
Name  ? ovate family protein 1 Brief Description  ovate family protein 1
TAIR Computational Description  ovate family protein 1;(source:Araport11)
TAIR Curator Summary  Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation. May also directly affect microtubule organization via interactions with TON2.
TAIR Short Description  ovate family protein 1
TAIR Aliases  ATOFP1, OFP1

4 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1251  
Location: Chr5:324428-325678

Gene models - OFP1 AT5G01840

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
OFP1_ARATH function Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors. Controls the subcellular localization of the homeodomain protein BLH1. Plays a role in the regulation of cell elongation by controlling the expression of GA20OX1, a gene that encodes a key enzyme in gibberellin biosynthesis. May play a role in double-stranded DNA repair through the DNA non-homologous end joining (NHEJ) pathway along with KU70 and KU80 protein complex. Possesses DNA-binding activity towards double-stranded and single-stranded DNA in vitro.
OFP1_ARATH tissue specificity Expressed in roots, xylem of stems, flower buds and siliques.

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
cytoskeleton  ? ECO  
molecular function
DNA binding  ? ECO  
biological process
negative regulation of DNA-templated transcription  ? ECO  
DNA repair  ? ECO  
cortical microtubule organization  ? ECO  
regulation of unidimensional cell growth  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets