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Gene : AT5G01720 A. thaliana

DB identifier  ? AT5G01720 Secondary Identifier  ? locus:2149805
Brief Description  RNI-like superfamily protein
TAIR Computational Description  RNI-like superfamily protein;(source:Araport11)
TAIR Curator Summary  RAE1 is an F-box protein component of a SCF-type E3 ligase complex. It is part of an alumium induced regulatory loop: its activity is induced by STOP1 and it in turn ubiquitinates STOP1 which is then targeted for degradation.
TAIR Short Description  RNI-like superfamily protein
TAIR Aliases  RAE1

0 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4369  
Location: Chr5:266278-270646 reverse strand

Gene models - AT5G01720 AT5G01720

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
SCF ubiquitin ligase complex  ? ECO  
nucleus  ? ECO  
molecular function
No terms in this category.
biological process
protein ubiquitination  ? ECO  
ubiquitin-dependent protein catabolic process  ? ECO  
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets