External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 41, Exons: 16, Five Prime UTRs: 2, Gene: 1, mRNAs: 5, Three Prime UTRs: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38550:CDS:1 | 52 | Chr4: 18025886-18025937 | Arabidopsis thaliana |
AT4G38550:CDS:2 | 218 | Chr4: 18026082-18026299 | Arabidopsis thaliana |
AT4G38550:CDS:4 | 105 | Chr4: 18026404-18026508 | Arabidopsis thaliana |
AT4G38550:CDS:6 | 129 | Chr4: 18026589-18026717 | Arabidopsis thaliana |
AT4G38550:CDS:7 | 123 | Chr4: 18026811-18026933 | Arabidopsis thaliana |
AT4G38550:CDS:8 | 120 | Chr4: 18027008-18027127 | Arabidopsis thaliana |
AT4G38550:CDS:10 | 147 | Chr4: 18027239-18027385 | Arabidopsis thaliana |
AT4G38550:CDS:11 | 207 | Chr4: 18027502-18027708 | Arabidopsis thaliana |
AT4G38550:CDS:12 | 738 | Chr4: 18027809-18028546 | Arabidopsis thaliana |
AT4G38550:CDS:1.1 | 52 | Chr4: 18025886-18025937 | Arabidopsis thaliana |
AT4G38550:CDS:2.1 | 218 | Chr4: 18026082-18026299 | Arabidopsis thaliana |
AT4G38550:CDS:4.1 | 105 | Chr4: 18026404-18026508 | Arabidopsis thaliana |
AT4G38550:CDS:6.1 | 129 | Chr4: 18026589-18026717 | Arabidopsis thaliana |
AT4G38550:CDS:7.1 | 123 | Chr4: 18026811-18026933 | Arabidopsis thaliana |
AT4G38550:CDS:9 | 378 | Chr4: 18027008-18027385 | Arabidopsis thaliana |
AT4G38550:CDS:11.1 | 207 | Chr4: 18027502-18027708 | Arabidopsis thaliana |
AT4G38550:CDS:12.1 | 738 | Chr4: 18027809-18028546 | Arabidopsis thaliana |
AT4G38550:CDS:1.2 | 52 | Chr4: 18025886-18025937 | Arabidopsis thaliana |
AT4G38550:CDS:2.2 | 218 | Chr4: 18026082-18026299 | Arabidopsis thaliana |
AT4G38550:CDS:4.2 | 105 | Chr4: 18026404-18026508 | Arabidopsis thaliana |
AT4G38550:CDS:6.2 | 129 | Chr4: 18026589-18026717 | Arabidopsis thaliana |
AT4G38550:CDS:7.2 | 123 | Chr4: 18026811-18026933 | Arabidopsis thaliana |
AT4G38550:CDS:8.1 | 120 | Chr4: 18027008-18027127 | Arabidopsis thaliana |
AT4G38550:CDS:10.1 | 147 | Chr4: 18027239-18027385 | Arabidopsis thaliana |
AT4G38550:CDS:11.2 | 207 | Chr4: 18027502-18027708 | Arabidopsis thaliana |
AT4G38550:CDS:12.2 | 738 | Chr4: 18027809-18028546 | Arabidopsis thaliana |
AT4G38550:CDS:3 | 93 | Chr4: 18026207-18026299 | Arabidopsis thaliana |
AT4G38550:CDS:4.3 | 105 | Chr4: 18026404-18026508 | Arabidopsis thaliana |
AT4G38550:CDS:6.3 | 129 | Chr4: 18026589-18026717 | Arabidopsis thaliana |
AT4G38550:CDS:7.3 | 123 | Chr4: 18026811-18026933 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38552:exon:1 | 3178 | Chr4: 18025587-18028764 | Arabidopsis thaliana |
AT4G38550:exon:1 | 122 | Chr4: 18025635-18025756 | Arabidopsis thaliana |
AT4G38550:exon:2 | 88 | Chr4: 18025850-18025937 | Arabidopsis thaliana |
AT4G38550:exon:11 | 378 | Chr4: 18027008-18027385 | Arabidopsis thaliana |
AT4G38550:exon:3 | 52 | Chr4: 18025886-18025937 | Arabidopsis thaliana |
AT4G38550:exon:4 | 218 | Chr4: 18026082-18026299 | Arabidopsis thaliana |
AT4G38550:exon:15 | 1103 | Chr4: 18027809-18028911 | Arabidopsis thaliana |
AT4G38550:exon:5 | 93 | Chr4: 18026207-18026299 | Arabidopsis thaliana |
AT4G38550:exon:6 | 105 | Chr4: 18026404-18026508 | Arabidopsis thaliana |
AT4G38550:exon:7 | 72 | Chr4: 18026437-18026508 | Arabidopsis thaliana |
AT4G38550:exon:8 | 129 | Chr4: 18026589-18026717 | Arabidopsis thaliana |
AT4G38550:exon:9 | 123 | Chr4: 18026811-18026933 | Arabidopsis thaliana |
AT4G38550:exon:10 | 120 | Chr4: 18027008-18027127 | Arabidopsis thaliana |
AT4G38550:exon:12 | 147 | Chr4: 18027239-18027385 | Arabidopsis thaliana |
AT4G38550:exon:13 | 207 | Chr4: 18027502-18027708 | Arabidopsis thaliana |
AT4G38550:exon:14 | 1032 | Chr4: 18027809-18028840 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38550:five_prime_UTR:1 | 122 | Chr4: 18025635-18025756 | Arabidopsis thaliana |
AT4G38550:five_prime_UTR:2 | 36 | Chr4: 18025850-18025885 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G38552 | locus:6530298228 | AT4G38552 | 3178 | Chr4: 18025587-18028764 | A. thaliana | Natural antisense transcript overlaps with AT4G38550;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G38550.1 | 2362 | Chr4: 18025635-18028911 |
AT4G38550.2 | 2244 | Chr4: 18025886-18028840 |
AT4G38550.3 | 2204 | Chr4: 18025886-18028911 |
AT4G38550.4 | 1956 | Chr4: 18026207-18028840 |
AT4G38550.5 | 1830 | Chr4: 18026437-18028840 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38550:three_prime_UTR:2 | 365 | Chr4: 18028547-18028911 | Arabidopsis thaliana |
AT4G38550:three_prime_UTR:1 | 294 | Chr4: 18028547-18028840 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...