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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38350:CDS:40 | 90 | Chr4: 17958324-17958413 | Arabidopsis thaliana |
AT4G38350:CDS:39 | 69 | Chr4: 17958499-17958567 | Arabidopsis thaliana |
AT4G38350:CDS:38 | 67 | Chr4: 17958654-17958720 | Arabidopsis thaliana |
AT4G38350:CDS:37 | 68 | Chr4: 17958870-17958937 | Arabidopsis thaliana |
AT4G38350:CDS:36 | 111 | Chr4: 17959165-17959275 | Arabidopsis thaliana |
AT4G38350:CDS:35 | 58 | Chr4: 17959395-17959452 | Arabidopsis thaliana |
AT4G38350:CDS:34 | 37 | Chr4: 17959540-17959576 | Arabidopsis thaliana |
AT4G38350:CDS:33 | 94 | Chr4: 17959663-17959756 | Arabidopsis thaliana |
AT4G38350:CDS:32 | 66 | Chr4: 17959894-17959959 | Arabidopsis thaliana |
AT4G38350:CDS:31 | 65 | Chr4: 17960031-17960095 | Arabidopsis thaliana |
AT4G38350:CDS:30 | 145 | Chr4: 17960200-17960344 | Arabidopsis thaliana |
AT4G38350:CDS:29 | 66 | Chr4: 17960411-17960476 | Arabidopsis thaliana |
AT4G38350:CDS:28 | 150 | Chr4: 17960678-17960827 | Arabidopsis thaliana |
AT4G38350:CDS:27 | 70 | Chr4: 17961016-17961085 | Arabidopsis thaliana |
AT4G38350:CDS:26 | 77 | Chr4: 17961179-17961255 | Arabidopsis thaliana |
AT4G38350:CDS:25 | 69 | Chr4: 17961355-17961423 | Arabidopsis thaliana |
AT4G38350:CDS:24 | 84 | Chr4: 17961639-17961722 | Arabidopsis thaliana |
AT4G38350:CDS:23 | 38 | Chr4: 17961861-17961898 | Arabidopsis thaliana |
AT4G38350:CDS:22 | 144 | Chr4: 17961992-17962135 | Arabidopsis thaliana |
AT4G38350:CDS:21 | 199 | Chr4: 17962207-17962405 | Arabidopsis thaliana |
AT4G38350:CDS:20 | 129 | Chr4: 17962497-17962625 | Arabidopsis thaliana |
AT4G38350:CDS:19 | 84 | Chr4: 17962977-17963060 | Arabidopsis thaliana |
AT4G38350:CDS:18 | 114 | Chr4: 17963177-17963290 | Arabidopsis thaliana |
AT4G38350:CDS:17 | 108 | Chr4: 17963402-17963509 | Arabidopsis thaliana |
AT4G38350:CDS:15 | 96 | Chr4: 17963582-17963677 | Arabidopsis thaliana |
AT4G38350:CDS:14 | 69 | Chr4: 17963830-17963898 | Arabidopsis thaliana |
AT4G38350:CDS:13 | 102 | Chr4: 17964074-17964175 | Arabidopsis thaliana |
AT4G38350:CDS:12 | 96 | Chr4: 17964292-17964387 | Arabidopsis thaliana |
AT4G38350:CDS:11 | 84 | Chr4: 17964478-17964561 | Arabidopsis thaliana |
AT4G38350:CDS:10 | 118 | Chr4: 17964665-17964782 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38350:exon:41 | 318 | Chr4: 17958096-17958413 | Arabidopsis thaliana |
AT4G38350:exon:17 | 108 | Chr4: 17963402-17963509 | Arabidopsis thaliana |
AT4G38350:exon:15 | 96 | Chr4: 17963582-17963677 | Arabidopsis thaliana |
AT4G38350:exon:40 | 237 | Chr4: 17958177-17958413 | Arabidopsis thaliana |
AT4G38350:exon:39 | 69 | Chr4: 17958499-17958567 | Arabidopsis thaliana |
AT4G38350:exon:38 | 67 | Chr4: 17958654-17958720 | Arabidopsis thaliana |
AT4G38350:exon:37 | 68 | Chr4: 17958870-17958937 | Arabidopsis thaliana |
AT4G38350:exon:36 | 111 | Chr4: 17959165-17959275 | Arabidopsis thaliana |
AT4G38350:exon:35 | 58 | Chr4: 17959395-17959452 | Arabidopsis thaliana |
AT4G38350:exon:34 | 37 | Chr4: 17959540-17959576 | Arabidopsis thaliana |
AT4G38350:exon:33 | 94 | Chr4: 17959663-17959756 | Arabidopsis thaliana |
AT4G38350:exon:32 | 66 | Chr4: 17959894-17959959 | Arabidopsis thaliana |
AT4G38350:exon:31 | 65 | Chr4: 17960031-17960095 | Arabidopsis thaliana |
AT4G38350:exon:30 | 145 | Chr4: 17960200-17960344 | Arabidopsis thaliana |
AT4G38350:exon:29 | 66 | Chr4: 17960411-17960476 | Arabidopsis thaliana |
AT4G38350:exon:28 | 150 | Chr4: 17960678-17960827 | Arabidopsis thaliana |
AT4G38350:exon:27 | 70 | Chr4: 17961016-17961085 | Arabidopsis thaliana |
AT4G38350:exon:26 | 77 | Chr4: 17961179-17961255 | Arabidopsis thaliana |
AT4G38350:exon:25 | 69 | Chr4: 17961355-17961423 | Arabidopsis thaliana |
AT4G38350:exon:24 | 84 | Chr4: 17961639-17961722 | Arabidopsis thaliana |
AT4G38350:exon:23 | 38 | Chr4: 17961861-17961898 | Arabidopsis thaliana |
AT4G38350:exon:22 | 144 | Chr4: 17961992-17962135 | Arabidopsis thaliana |
AT4G38350:exon:21 | 199 | Chr4: 17962207-17962405 | Arabidopsis thaliana |
AT4G38350:exon:20 | 129 | Chr4: 17962497-17962625 | Arabidopsis thaliana |
AT4G38350:exon:19 | 84 | Chr4: 17962977-17963060 | Arabidopsis thaliana |
AT4G38350:exon:18 | 114 | Chr4: 17963177-17963290 | Arabidopsis thaliana |
AT4G38350:exon:16 | 276 | Chr4: 17963402-17963677 | Arabidopsis thaliana |
AT4G38350:exon:14 | 69 | Chr4: 17963830-17963898 | Arabidopsis thaliana |
AT4G38350:exon:13 | 102 | Chr4: 17964074-17964175 | Arabidopsis thaliana |
AT4G38350:exon:12 | 96 | Chr4: 17964292-17964387 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38350:five_prime_UTR:1 | 116 | Chr4: 17966847-17966962 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G38350.1 | 4166 | Chr4: 17958096-17966962 |
AT4G38350.2 | 4157 | Chr4: 17958177-17966962 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38350:three_prime_UTR:2 | 228 | Chr4: 17958096-17958323 | Arabidopsis thaliana |
AT4G38350:three_prime_UTR:1 | 147 | Chr4: 17958177-17958323 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4JTN1_ARATH F4JTN0_ARATH | similarity | Belongs to the patched family. |
Function
Gene Ontology
cellular component | |
---|---|
plant-type vacuole | ECO |
membrane | ECO |
vacuole | ECO |
molecular function | |
lipid transporter activity | ECO |
biological process | |
pollen tube development | ECO |
regulation of sphingolipid biosynthetic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...