External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38225:CDS:1 | 217 | Chr4: 17927230-17927446 | Arabidopsis thaliana |
AT4G38225:CDS:2 | 632 | Chr4: 17927565-17928196 | Arabidopsis thaliana |
AT4G38225:CDS:4 | 201 | Chr4: 17928285-17928485 | Arabidopsis thaliana |
AT4G38225:CDS:6 | 42 | Chr4: 17928572-17928613 | Arabidopsis thaliana |
AT4G38225:CDS:1.1 | 217 | Chr4: 17927230-17927446 | Arabidopsis thaliana |
AT4G38225:CDS:2.1 | 632 | Chr4: 17927565-17928196 | Arabidopsis thaliana |
AT4G38225:CDS:4.1 | 201 | Chr4: 17928285-17928485 | Arabidopsis thaliana |
AT4G38225:CDS:5 | 36 | Chr4: 17928572-17928607 | Arabidopsis thaliana |
AT4G38225:CDS:7 | 12 | Chr4: 17928771-17928782 | Arabidopsis thaliana |
AT4G38225:CDS:1.2 | 217 | Chr4: 17927230-17927446 | Arabidopsis thaliana |
AT4G38225:CDS:3 | 710 | Chr4: 17927565-17928274 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38225:exon:8 | 192 | Chr4: 17928572-17928763 | Arabidopsis thaliana |
AT4G38225:exon:1 | 249 | Chr4: 17927198-17927446 | Arabidopsis thaliana |
AT4G38225:exon:3 | 632 | Chr4: 17927565-17928196 | Arabidopsis thaliana |
AT4G38225:exon:5 | 201 | Chr4: 17928285-17928485 | Arabidopsis thaliana |
AT4G38225:exon:6 | 36 | Chr4: 17928572-17928607 | Arabidopsis thaliana |
AT4G38225:exon:9 | 131 | Chr4: 17928771-17928901 | Arabidopsis thaliana |
AT4G38225:exon:2 | 225 | Chr4: 17927222-17927446 | Arabidopsis thaliana |
AT4G38225:exon:4 | 921 | Chr4: 17927565-17928485 | Arabidopsis thaliana |
AT4G38225:exon:7 | 191 | Chr4: 17928572-17928762 | Arabidopsis thaliana |
AT4G38230:exon:19 | 202 | Chr4: 17928677-17928878 | Arabidopsis thaliana |
AT4G38230:exon:18 | 62 | Chr4: 17928817-17928878 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38225:five_prime_UTR:1 | 32 | Chr4: 17927198-17927229 | Arabidopsis thaliana |
AT4G38225:five_prime_UTR:2 | 8 | Chr4: 17927222-17927229 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G38230 | locus:2120973 | CPK26 | calcium-dependent protein kinase 26 | 2835 | Chr4: 17928677-17931511 | A. thaliana | calcium-dependent protein kinase 26;(source:Araport11) | member of Calcium Dependent Protein Kinase | calcium-dependent protein kinase 26 | ATCPK26, CPK26 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G38225.1 | 1274 | Chr4: 17927198-17928763 |
AT4G38225.3 | 1249 | Chr4: 17927198-17928901 |
AT4G38225.2 | 1337 | Chr4: 17927222-17928762 |
AT4G38230.1 | 1800 | Chr4: 17928677-17931182 |
AT4G38230.2 | 1946 | Chr4: 17928817-17931502 |
AT4G38230.3 | 1802 | Chr4: 17928817-17931511 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G38225:three_prime_UTR:3 | 150 | Chr4: 17928614-17928763 | Arabidopsis thaliana |
AT4G38225:three_prime_UTR:4 | 119 | Chr4: 17928783-17928901 | Arabidopsis thaliana |
AT4G38225:three_prime_UTR:1 | 211 | Chr4: 17928275-17928485 | Arabidopsis thaliana |
AT4G38225:three_prime_UTR:2 | 191 | Chr4: 17928572-17928762 | Arabidopsis thaliana |
AT4G38230:three_prime_UTR:3 | 202 | Chr4: 17928677-17928878 | Arabidopsis thaliana |
AT4G38230:three_prime_UTR:2 | 62 | Chr4: 17928817-17928878 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...