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Gene : EDA40 A. thaliana

DB identifier  ? AT4G37890 Secondary Identifier  ? locus:2121008
Name  ? embryo sac development arrest 40 Brief Description  Zinc finger (C3HC4-type RING finger) family protein
TAIR Computational Description  Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)
TAIR Curator Summary  Involved in shoot regenaration from root explants.
TAIR Short Description  Zinc finger (C3HC4-type RING finger) family protein
TAIR Aliases  EDA40

0 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2398  
Location: Chr4:17812698-17815095 reverse strand

Gene models - EDA40 AT4G37890

? Gene models

Transcripts: 2  Exons: 3  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
EDA40_ARATH function Probable E3 ubiquitin-protein ligase involved in female gametophyte development. Required for fusion of polar nuclei in the embryo sac.

2 Proteins

Function

Gene Ontology

cellular component
plasmodesma  ? ECO  
molecular function
transferase activity  ? ECO  
metal ion binding  ? ECO  
biological process
polar nucleus fusion  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets