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Gene : AT4G37130 A. thaliana

DB identifier  ? AT4G37130 Secondary Identifier  ? locus:2115055
Brief Description  hydroxyproline-rich glycoprotein family protein
TAIR Computational Description  hydroxyproline-rich glycoprotein family protein;(source:Araport11)
TAIR Curator Summary  Encodes a member of the Nup62 subcomplex of the Arabidopsis NPC.
TAIR Short Description  hydroxyproline-rich glycoprotein family protein
TAIR Aliases  NUP58, TCU1

0 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2658  
Location: Chr4:17489355-17492012

Gene models - AT4G37130 AT4G37130

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NUP58_ARATH developmental stage Detected at all developmental stages.
NUP58_ARATH function Involved in nucleocytoplasmic trafficking. May have regulatory roles in the gibberellin pathway, in auxin signaling and in light perception.
NUP58_ARATH similarity Belongs to the NUP58 family.
NUP58_ARATH tissue specificity Ubiquitous. Higherst expression in cauline leaves, lowest in roots.

1 Proteins

Function

Gene Ontology

cellular component
nuclear envelope  ? ECO  
nuclear pore  ? ECO  
molecular function
nuclear localization sequence binding  ? ECO  
structural constituent of nuclear pore  ? ECO  
biological process
mRNA transport  ? ECO  
protein transport  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets