External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 38, Exons: 18, Five Prime UTRs: 6, mRNAs: 4, Three Prime UTRs: 4, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G37080:CDS:1 | 72 | Chr4: 17473719-17473790 | Arabidopsis thaliana |
AT4G37080:CDS:3 | 114 | Chr4: 17474238-17474351 | Arabidopsis thaliana |
AT4G37080:CDS:4 | 117 | Chr4: 17474433-17474549 | Arabidopsis thaliana |
AT4G37080:CDS:5 | 564 | Chr4: 17474643-17475206 | Arabidopsis thaliana |
AT4G37080:CDS:6 | 302 | Chr4: 17475295-17475596 | Arabidopsis thaliana |
AT4G37080:CDS:7 | 100 | Chr4: 17475688-17475787 | Arabidopsis thaliana |
AT4G37080:CDS:8 | 60 | Chr4: 17475878-17475937 | Arabidopsis thaliana |
AT4G37080:CDS:9 | 84 | Chr4: 17476024-17476107 | Arabidopsis thaliana |
AT4G37080:CDS:11 | 126 | Chr4: 17476201-17476326 | Arabidopsis thaliana |
AT4G37080:CDS:1.1 | 72 | Chr4: 17473719-17473790 | Arabidopsis thaliana |
AT4G37080:CDS:3.1 | 114 | Chr4: 17474238-17474351 | Arabidopsis thaliana |
AT4G37080:CDS:4.1 | 117 | Chr4: 17474433-17474549 | Arabidopsis thaliana |
AT4G37080:CDS:5.1 | 564 | Chr4: 17474643-17475206 | Arabidopsis thaliana |
AT4G37080:CDS:6.1 | 302 | Chr4: 17475295-17475596 | Arabidopsis thaliana |
AT4G37080:CDS:7.1 | 100 | Chr4: 17475688-17475787 | Arabidopsis thaliana |
AT4G37080:CDS:8.1 | 60 | Chr4: 17475878-17475937 | Arabidopsis thaliana |
AT4G37080:CDS:9.1 | 84 | Chr4: 17476024-17476107 | Arabidopsis thaliana |
AT4G37080:CDS:10 | 117 | Chr4: 17476201-17476317 | Arabidopsis thaliana |
AT4G37080:CDS:12 | 303 | Chr4: 17476414-17476716 | Arabidopsis thaliana |
AT4G37080:CDS:1.2 | 72 | Chr4: 17473719-17473790 | Arabidopsis thaliana |
AT4G37080:CDS:3.2 | 114 | Chr4: 17474238-17474351 | Arabidopsis thaliana |
AT4G37080:CDS:4.2 | 117 | Chr4: 17474433-17474549 | Arabidopsis thaliana |
AT4G37080:CDS:5.2 | 564 | Chr4: 17474643-17475206 | Arabidopsis thaliana |
AT4G37080:CDS:6.2 | 302 | Chr4: 17475295-17475596 | Arabidopsis thaliana |
AT4G37080:CDS:7.2 | 100 | Chr4: 17475688-17475787 | Arabidopsis thaliana |
AT4G37080:CDS:8.2 | 60 | Chr4: 17475878-17475937 | Arabidopsis thaliana |
AT4G37080:CDS:9.2 | 84 | Chr4: 17476024-17476107 | Arabidopsis thaliana |
AT4G37080:CDS:10.1 | 117 | Chr4: 17476201-17476317 | Arabidopsis thaliana |
AT4G37080:CDS:12.1 | 303 | Chr4: 17476414-17476716 | Arabidopsis thaliana |
AT4G37080:CDS:2 | 147 | Chr4: 17474205-17474351 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G37080:exon:1 | 491 | Chr4: 17472980-17473470 | Arabidopsis thaliana |
AT4G37080:exon:15 | 752 | Chr4: 17476201-17476952 | Arabidopsis thaliana |
AT4G37080:exon:2 | 467 | Chr4: 17473004-17473470 | Arabidopsis thaliana |
AT4G37080:exon:4 | 128 | Chr4: 17473663-17473790 | Arabidopsis thaliana |
AT4G37080:exon:18 | 566 | Chr4: 17476414-17476979 | Arabidopsis thaliana |
AT4G37080:exon:3 | 199 | Chr4: 17473272-17473470 | Arabidopsis thaliana |
AT4G37080:exon:5 | 124 | Chr4: 17473667-17473790 | Arabidopsis thaliana |
AT4G37080:exon:7 | 114 | Chr4: 17474238-17474351 | Arabidopsis thaliana |
AT4G37080:exon:16 | 539 | Chr4: 17476414-17476952 | Arabidopsis thaliana |
AT4G37080:exon:6 | 583 | Chr4: 17473769-17474351 | Arabidopsis thaliana |
AT4G37080:exon:8 | 117 | Chr4: 17474433-17474549 | Arabidopsis thaliana |
AT4G37080:exon:9 | 564 | Chr4: 17474643-17475206 | Arabidopsis thaliana |
AT4G37080:exon:10 | 302 | Chr4: 17475295-17475596 | Arabidopsis thaliana |
AT4G37080:exon:11 | 100 | Chr4: 17475688-17475787 | Arabidopsis thaliana |
AT4G37080:exon:12 | 60 | Chr4: 17475878-17475937 | Arabidopsis thaliana |
AT4G37080:exon:13 | 84 | Chr4: 17476024-17476107 | Arabidopsis thaliana |
AT4G37080:exon:14 | 117 | Chr4: 17476201-17476317 | Arabidopsis thaliana |
AT4G37080:exon:17 | 558 | Chr4: 17476414-17476971 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G37080:five_prime_UTR:1 | 491 | Chr4: 17472980-17473470 | Arabidopsis thaliana |
AT4G37080:five_prime_UTR:2 | 467 | Chr4: 17473004-17473470 | Arabidopsis thaliana |
AT4G37080:five_prime_UTR:4 | 56 | Chr4: 17473663-17473718 | Arabidopsis thaliana |
AT4G37080:five_prime_UTR:3 | 199 | Chr4: 17473272-17473470 | Arabidopsis thaliana |
AT4G37080:five_prime_UTR:5 | 52 | Chr4: 17473667-17473718 | Arabidopsis thaliana |
AT4G37080:five_prime_UTR:6 | 436 | Chr4: 17473769-17474204 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G37080.4 | 2712 | Chr4: 17472980-17476952 |
AT4G37080.3 | 2619 | Chr4: 17473004-17476979 |
AT4G37080.2 | 2320 | Chr4: 17473272-17476952 |
AT4G37080.1 | 2485 | Chr4: 17473769-17476971 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G37080:three_prime_UTR:1 | 626 | Chr4: 17476327-17476952 | Arabidopsis thaliana |
AT4G37080:three_prime_UTR:4 | 263 | Chr4: 17476717-17476979 | Arabidopsis thaliana |
AT4G37080:three_prime_UTR:2 | 236 | Chr4: 17476717-17476952 | Arabidopsis thaliana |
AT4G37080:three_prime_UTR:3 | 255 | Chr4: 17476717-17476971 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE84335 | 1058 | Chr4: 17471941-17472998 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE84335:transposon_fragment:1 | 1058 | Chr4: 17471941-17472998 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...