Lists
This Gene is in one list:
External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35519:CDS:1 | 123 | Chr4: 16865248-16865370 | Arabidopsis thaliana |
AT4G35520:CDS:1 | 126 | Chr4: 16865488-16865613 | Arabidopsis thaliana |
AT4G35520:CDS:2 | 52 | Chr4: 16865694-16865745 | Arabidopsis thaliana |
AT4G35520:CDS:3 | 48 | Chr4: 16865835-16865882 | Arabidopsis thaliana |
AT4G35520:CDS:4 | 155 | Chr4: 16865964-16866118 | Arabidopsis thaliana |
AT4G35520:CDS:5 | 58 | Chr4: 16866208-16866265 | Arabidopsis thaliana |
AT4G35520:CDS:6 | 58 | Chr4: 16866441-16866498 | Arabidopsis thaliana |
AT4G35520:CDS:7 | 93 | Chr4: 16866611-16866703 | Arabidopsis thaliana |
AT4G35520:CDS:9 | 160 | Chr4: 16866770-16866929 | Arabidopsis thaliana |
AT4G35520:CDS:10 | 16 | Chr4: 16867036-16867051 | Arabidopsis thaliana |
AT4G35520:CDS:12 | 221 | Chr4: 16867157-16867377 | Arabidopsis thaliana |
AT4G35520:CDS:14 | 70 | Chr4: 16867457-16867526 | Arabidopsis thaliana |
AT4G35520:CDS:15 | 81 | Chr4: 16867607-16867687 | Arabidopsis thaliana |
AT4G35520:CDS:17 | 1302 | Chr4: 16867819-16869120 | Arabidopsis thaliana |
AT4G35520:CDS:18 | 195 | Chr4: 16869228-16869422 | Arabidopsis thaliana |
AT4G35520:CDS:19 | 74 | Chr4: 16869648-16869721 | Arabidopsis thaliana |
AT4G35520:CDS:20 | 201 | Chr4: 16869823-16870023 | Arabidopsis thaliana |
AT4G35520:CDS:21 | 45 | Chr4: 16870179-16870223 | Arabidopsis thaliana |
AT4G35520:CDS:22 | 54 | Chr4: 16870330-16870383 | Arabidopsis thaliana |
AT4G35520:CDS:24 | 107 | Chr4: 16870502-16870608 | Arabidopsis thaliana |
AT4G35520:CDS:25 | 49 | Chr4: 16870728-16870776 | Arabidopsis thaliana |
AT4G35520:CDS:26 | 60 | Chr4: 16870879-16870938 | Arabidopsis thaliana |
AT4G35520:CDS:27 | 73 | Chr4: 16871021-16871093 | Arabidopsis thaliana |
AT4G35520:CDS:29 | 86 | Chr4: 16871208-16871293 | Arabidopsis thaliana |
AT4G35520:CDS:30 | 159 | Chr4: 16871369-16871527 | Arabidopsis thaliana |
AT4G35520:CDS:1.1 | 126 | Chr4: 16865488-16865613 | Arabidopsis thaliana |
AT4G35520:CDS:2.1 | 52 | Chr4: 16865694-16865745 | Arabidopsis thaliana |
AT4G35520:CDS:3.1 | 48 | Chr4: 16865835-16865882 | Arabidopsis thaliana |
AT4G35520:CDS:4.1 | 155 | Chr4: 16865964-16866118 | Arabidopsis thaliana |
AT4G35520:CDS:5.1 | 58 | Chr4: 16866208-16866265 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35519:exon:1 | 123 | Chr4: 16865248-16865370 | Arabidopsis thaliana |
AT4G35520:exon:1 | 310 | Chr4: 16865304-16865613 | Arabidopsis thaliana |
AT4G35520:exon:11 | 160 | Chr4: 16866770-16866929 | Arabidopsis thaliana |
AT4G35520:exon:12 | 16 | Chr4: 16867036-16867051 | Arabidopsis thaliana |
AT4G35520:exon:15 | 221 | Chr4: 16867157-16867377 | Arabidopsis thaliana |
AT4G35520:exon:2 | 162 | Chr4: 16865452-16865613 | Arabidopsis thaliana |
AT4G35520:exon:31 | 126 | Chr4: 16871021-16871146 | Arabidopsis thaliana |
AT4G35520:exon:3 | 126 | Chr4: 16865488-16865613 | Arabidopsis thaliana |
AT4G35520:exon:4 | 52 | Chr4: 16865694-16865745 | Arabidopsis thaliana |
AT4G35520:exon:5 | 48 | Chr4: 16865835-16865882 | Arabidopsis thaliana |
AT4G35520:exon:6 | 155 | Chr4: 16865964-16866118 | Arabidopsis thaliana |
AT4G35520:exon:7 | 58 | Chr4: 16866208-16866265 | Arabidopsis thaliana |
AT4G35520:exon:8 | 58 | Chr4: 16866441-16866498 | Arabidopsis thaliana |
AT4G35520:exon:9 | 93 | Chr4: 16866611-16866703 | Arabidopsis thaliana |
AT4G35520:exon:10 | 129 | Chr4: 16866770-16866898 | Arabidopsis thaliana |
AT4G35520:exon:16 | 157 | Chr4: 16867221-16867377 | Arabidopsis thaliana |
AT4G35520:exon:13 | 276 | Chr4: 16867102-16867377 | Arabidopsis thaliana |
AT4G35520:exon:19 | 1338 | Chr4: 16867783-16869120 | Arabidopsis thaliana |
AT4G35520:exon:26 | 149 | Chr4: 16870460-16870608 | Arabidopsis thaliana |
AT4G35520:exon:14 | 250 | Chr4: 16867128-16867377 | Arabidopsis thaliana |
AT4G35520:exon:17 | 70 | Chr4: 16867457-16867526 | Arabidopsis thaliana |
AT4G35520:exon:18 | 81 | Chr4: 16867607-16867687 | Arabidopsis thaliana |
AT4G35520:exon:20 | 1302 | Chr4: 16867819-16869120 | Arabidopsis thaliana |
AT4G35520:exon:21 | 195 | Chr4: 16869228-16869422 | Arabidopsis thaliana |
AT4G35520:exon:22 | 74 | Chr4: 16869648-16869721 | Arabidopsis thaliana |
AT4G35520:exon:23 | 201 | Chr4: 16869823-16870023 | Arabidopsis thaliana |
AT4G35520:exon:24 | 45 | Chr4: 16870179-16870223 | Arabidopsis thaliana |
AT4G35520:exon:25 | 54 | Chr4: 16870330-16870383 | Arabidopsis thaliana |
AT4G35520:exon:27 | 107 | Chr4: 16870502-16870608 | Arabidopsis thaliana |
AT4G35520:exon:28 | 49 | Chr4: 16870728-16870776 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G35520:five_prime_UTR:1 | 184 | Chr4: 16865304-16865487 | Arabidopsis thaliana |
AT4G35520:five_prime_UTR:2 | 36 | Chr4: 16865452-16865487 | Arabidopsis thaliana |
AT4G35520:five_prime_UTR:3 | 36 | Chr4: 16867102-16867137 | Arabidopsis thaliana |
AT4G35520:five_prime_UTR:4 | 10 | Chr4: 16867128-16867137 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G35519 | locus:4515103493 | AT4G35519 | 123 | Chr4: 16865248-16865370 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G35519.1 | 123 | Chr4: 16865248-16865370 |
AT4G35520.2 | 3727 | Chr4: 16865304-16871527 |
AT4G35520.3 | 3646 | Chr4: 16865304-16871527 |
AT4G35520.4 | 3276 | Chr4: 16865452-16871146 |
AT4G35520.1 | 3468 | Chr4: 16865488-16871527 |
AT4G35520.5 | 3474 | Chr4: 16865488-16871527 |
AT4G35520.6 | 3432 | Chr4: 16865488-16871527 |
AT4G35520.7 | 2910 | Chr4: 16867102-16871527 |
AT4G35520.8 | 2806 | Chr4: 16867128-16871527 |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
MLH3_ARATH | developmental stage | Expressed during prophase I of meiosis. |
MLH3_ARATH | function | Involved in DNA mismatch repair (MMR), correcting insertion-deletion loops (IDLs) resulting from DNA replication, DNA damage or from recombination events between non-identical sequences during meiosis. Component of the MutLbeta heterodimer, which probably forms a ternary complex with the MutSbeta heterodimer that initially recognizes the DNA mismatches. This complex is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis. Plays a major role in promoting meiotic crossing-over and is involved in maintaining the genetic stability of simple sequence repeats by correction of frameshift intermediates. |
A0A1P8B434_ARATH A0A1P8B439_ARATH A0A1P8B445_ARATH MLH3_ARATH A0A1P8B465_ARATH A0A1P8B429_ARATH | similarity | Belongs to the DNA mismatch repair MutL/HexB family. |
MLH3_ARATH | tissue specificity | Expressed in reproductive tissues. |
Function
Gene Ontology
cellular component | |
---|---|
mismatch repair complex | ECO |
chromosome | ECO |
nucleus | ECO |
molecular function | |
ATP binding | ECO |
ATP hydrolysis activity | ECO |
ATP-dependent DNA damage sensor activity | ECO |
biological process | |
reciprocal meiotic recombination | ECO |
mismatch repair | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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