help  | faq  | software  | BAR
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : RHA3B A. thaliana

DB identifier  ? AT4G35480 Secondary Identifier  ? locus:2117622
Name  ? RING-H2 finger A3B Brief Description  RING-H2 finger A3B
TAIR Computational Description  RING-H2 finger A3B;(source:Araport11)
TAIR Curator Summary  Encodes a putative RING-H2 finger protein RHA3b.
TAIR Short Description  RING-H2 finger A3B
TAIR Aliases  ATL45, RHA3B

0 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1064  
Location: Chr4:16851972-16853035 reverse strand

Gene models - RHA3B AT4G35480

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ATL45_ARATH function E3 ubiquitin-protein ligase that possess E3 ubiquitin ligase activity in vitro and mediates protein monoubiquitination (Ref.10). Triggers the monoubiquitination of phosphorylated BIK1 in response to pathogen-associated molecular pattern (PAMP) detection (Ref.10). May be involved in the early steps of the plant defense signaling pathway (Probable).
ATL45_ARATH pathway Protein modification; protein ubiquitination.
ATL45_ARATH similarity Belongs to the RING-type zinc finger family. ATL subfamily.

1 Proteins

Function

Gene Ontology

cellular component
membrane  ? ECO  
molecular function
ubiquitin protein ligase activity  ? ECO  
metal ion binding  ? ECO  
biological process
defense response  ? ECO  
protein monoubiquitination  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets