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Gene : GATA3 A. thaliana

DB identifier  ? AT4G34680 Secondary Identifier  ? locus:2139594
Name  ? GATA transcription factor 3 Brief Description  GATA transcription factor 3
TAIR Computational Description  GATA transcription factor 3;(source:Araport11)
TAIR Curator Summary  Encodes a member of the GATA factor family of zinc finger transcription factors.
TAIR Short Description  GATA transcription factor 3
TAIR Aliases  GATA3

0 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1728  
Location: Chr4:16553145-16554872

Gene models - GATA3 AT4G34680

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GATA3_ARATH function Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.
GATA3_ARATH similarity Belongs to the type IV zinc-finger family. Class A subfamily.
GATA3_ARATH tissue specificity Mostly expressed in roots. Also expressed in stems, flowers and leaves.

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
nucleus  ? ECO  
molecular function
zinc ion binding  ? ECO  
DNA-binding transcription factor activity  ? ECO  
transcription cis-regulatory region binding  ? ECO  
biological process
positive regulation of DNA-templated transcription  ? ECO  
circadian rhythm  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets