External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G34020:CDS:10 | 216 | Chr4: 16298553-16298768 | Arabidopsis thaliana |
AT4G34020:CDS:9 | 138 | Chr4: 16298848-16298985 | Arabidopsis thaliana |
AT4G34020:CDS:8 | 201 | Chr4: 16299209-16299409 | Arabidopsis thaliana |
AT4G34020:CDS:7 | 78 | Chr4: 16299638-16299715 | Arabidopsis thaliana |
AT4G34020:CDS:6 | 180 | Chr4: 16299819-16299998 | Arabidopsis thaliana |
AT4G34020:CDS:4 | 150 | Chr4: 16300088-16300237 | Arabidopsis thaliana |
AT4G34020:CDS:2 | 201 | Chr4: 16300350-16300550 | Arabidopsis thaliana |
AT4G34020:CDS:1 | 255 | Chr4: 16300643-16300897 | Arabidopsis thaliana |
AT4G34020:CDS:10.1 | 216 | Chr4: 16298553-16298768 | Arabidopsis thaliana |
AT4G34020:CDS:9.1 | 138 | Chr4: 16298848-16298985 | Arabidopsis thaliana |
AT4G34020:CDS:8.1 | 201 | Chr4: 16299209-16299409 | Arabidopsis thaliana |
AT4G34020:CDS:7.1 | 78 | Chr4: 16299638-16299715 | Arabidopsis thaliana |
AT4G34020:CDS:6.1 | 180 | Chr4: 16299819-16299998 | Arabidopsis thaliana |
AT4G34020:CDS:5 | 144 | Chr4: 16300088-16300231 | Arabidopsis thaliana |
AT4G34020:CDS:10.2 | 216 | Chr4: 16298553-16298768 | Arabidopsis thaliana |
AT4G34020:CDS:9.2 | 138 | Chr4: 16298848-16298985 | Arabidopsis thaliana |
AT4G34020:CDS:8.2 | 201 | Chr4: 16299209-16299409 | Arabidopsis thaliana |
AT4G34020:CDS:7.2 | 78 | Chr4: 16299638-16299715 | Arabidopsis thaliana |
AT4G34020:CDS:6.2 | 180 | Chr4: 16299819-16299998 | Arabidopsis thaliana |
AT4G34020:CDS:5.1 | 144 | Chr4: 16300088-16300231 | Arabidopsis thaliana |
AT4G34020:CDS:10.3 | 216 | Chr4: 16298553-16298768 | Arabidopsis thaliana |
AT4G34020:CDS:9.3 | 138 | Chr4: 16298848-16298985 | Arabidopsis thaliana |
AT4G34020:CDS:8.3 | 201 | Chr4: 16299209-16299409 | Arabidopsis thaliana |
AT4G34020:CDS:7.3 | 78 | Chr4: 16299638-16299715 | Arabidopsis thaliana |
AT4G34020:CDS:6.3 | 180 | Chr4: 16299819-16299998 | Arabidopsis thaliana |
AT4G34020:CDS:4.1 | 150 | Chr4: 16300088-16300237 | Arabidopsis thaliana |
AT4G34020:CDS:3 | 96 | Chr4: 16300350-16300445 | Arabidopsis thaliana |
AT4G34020:CDS:1.1 | 255 | Chr4: 16300643-16300897 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G34000:exon:12 | 395 | Chr4: 16297891-16298285 | Arabidopsis thaliana |
AT4G34020:exon:13 | 507 | Chr4: 16298262-16298768 | Arabidopsis thaliana |
AT4G34020:exon:4 | 201 | Chr4: 16300350-16300550 | Arabidopsis thaliana |
AT4G34020:exon:1 | 357 | Chr4: 16300643-16300999 | Arabidopsis thaliana |
AT4G34020:exon:6 | 233 | Chr4: 16300088-16300320 | Arabidopsis thaliana |
AT4G34020:exon:3 | 232 | Chr4: 16300350-16300581 | Arabidopsis thaliana |
AT4G34020:exon:12 | 504 | Chr4: 16298265-16298768 | Arabidopsis thaliana |
AT4G34020:exon:11 | 138 | Chr4: 16298848-16298985 | Arabidopsis thaliana |
AT4G34020:exon:10 | 201 | Chr4: 16299209-16299409 | Arabidopsis thaliana |
AT4G34020:exon:9 | 78 | Chr4: 16299638-16299715 | Arabidopsis thaliana |
AT4G34020:exon:8 | 180 | Chr4: 16299819-16299998 | Arabidopsis thaliana |
AT4G34020:exon:7 | 150 | Chr4: 16300088-16300237 | Arabidopsis thaliana |
AT4G34020:exon:5 | 96 | Chr4: 16300350-16300445 | Arabidopsis thaliana |
AT4G34020:exon:2 | 296 | Chr4: 16300643-16300938 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G34020:five_prime_UTR:1 | 102 | Chr4: 16300898-16300999 | Arabidopsis thaliana |
AT4G34020:five_prime_UTR:4 | 89 | Chr4: 16300232-16300320 | Arabidopsis thaliana |
AT4G34020:five_prime_UTR:5 | 6 | Chr4: 16300232-16300237 | Arabidopsis thaliana |
AT4G34020:five_prime_UTR:3 | 232 | Chr4: 16300350-16300581 | Arabidopsis thaliana |
AT4G34020:five_prime_UTR:2 | 41 | Chr4: 16300898-16300938 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G34000 | locus:2118969 | ABF3 | abscisic acid responsive elements-binding factor 3 | 2952 | Chr4: 16295334-16298285 | A. thaliana | abscisic acid responsive elements-binding factor 3;(source:Araport11) | Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid. | abscisic acid responsive elements-binding factor 3 | ABF3, AtABF3, DPBF5 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G34000.2 | 2353 | Chr4: 16295334-16298285 |
AT4G34020.1 | 1812 | Chr4: 16298262-16300999 |
AT4G34020.4 | 1334 | Chr4: 16298265-16300320 |
AT4G34020.3 | 1483 | Chr4: 16298265-16300581 |
AT4G34020.2 | 1643 | Chr4: 16298265-16300938 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G34000:three_prime_UTR:4 | 314 | Chr4: 16297972-16298285 | Arabidopsis thaliana |
AT4G34020:three_prime_UTR:2 | 291 | Chr4: 16298262-16298552 | Arabidopsis thaliana |
AT4G34020:three_prime_UTR:1 | 288 | Chr4: 16298265-16298552 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
DJ1C_ARATH DJ1C_ARATH-2 | function | Plays an essential role in chloroplast development and is required for chloroplast integrity and viability. |
DJ1C_ARATH DJ1C_ARATH-2 | similarity | Belongs to the peptidase C56 family. |
DJ1C_ARATH DJ1C_ARATH-2 | tissue specificity | Expressed in young leaves. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast | ECO |
molecular function | |
No terms in this category. | |
biological process | |
chloroplast organization | ECO |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...