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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G33540:CDS:1 | 205 | Chr4: 16130882-16131086 | Arabidopsis thaliana |
AT4G33540:CDS:2 | 44 | Chr4: 16131183-16131226 | Arabidopsis thaliana |
AT4G33540:CDS:3 | 81 | Chr4: 16131613-16131693 | Arabidopsis thaliana |
AT4G33540:CDS:5 | 108 | Chr4: 16131947-16132054 | Arabidopsis thaliana |
AT4G33540:CDS:6 | 92 | Chr4: 16132280-16132371 | Arabidopsis thaliana |
AT4G33540:CDS:7 | 75 | Chr4: 16132525-16132599 | Arabidopsis thaliana |
AT4G33540:CDS:8 | 70 | Chr4: 16132684-16132753 | Arabidopsis thaliana |
AT4G33540:CDS:9 | 102 | Chr4: 16132999-16133100 | Arabidopsis thaliana |
AT4G33540:CDS:10 | 109 | Chr4: 16133205-16133313 | Arabidopsis thaliana |
AT4G33540:CDS:11 | 63 | Chr4: 16133417-16133479 | Arabidopsis thaliana |
AT4G33540:CDS:12 | 119 | Chr4: 16133560-16133678 | Arabidopsis thaliana |
AT4G33540:CDS:1.1 | 205 | Chr4: 16130882-16131086 | Arabidopsis thaliana |
AT4G33540:CDS:2.1 | 44 | Chr4: 16131183-16131226 | Arabidopsis thaliana |
AT4G33540:CDS:3.1 | 81 | Chr4: 16131613-16131693 | Arabidopsis thaliana |
AT4G33540:CDS:5.1 | 108 | Chr4: 16131947-16132054 | Arabidopsis thaliana |
AT4G33540:CDS:6.1 | 92 | Chr4: 16132280-16132371 | Arabidopsis thaliana |
AT4G33540:CDS:7.1 | 75 | Chr4: 16132525-16132599 | Arabidopsis thaliana |
AT4G33540:CDS:8.1 | 70 | Chr4: 16132684-16132753 | Arabidopsis thaliana |
AT4G33540:CDS:9.1 | 102 | Chr4: 16132999-16133100 | Arabidopsis thaliana |
AT4G33540:CDS:10.1 | 109 | Chr4: 16133205-16133313 | Arabidopsis thaliana |
AT4G33540:CDS:11.1 | 63 | Chr4: 16133417-16133479 | Arabidopsis thaliana |
AT4G33540:CDS:12.1 | 119 | Chr4: 16133560-16133678 | Arabidopsis thaliana |
AT4G33540:CDS:4 | 57 | Chr4: 16131637-16131693 | Arabidopsis thaliana |
AT4G33540:CDS:5.2 | 108 | Chr4: 16131947-16132054 | Arabidopsis thaliana |
AT4G33540:CDS:6.2 | 92 | Chr4: 16132280-16132371 | Arabidopsis thaliana |
AT4G33540:CDS:7.2 | 75 | Chr4: 16132525-16132599 | Arabidopsis thaliana |
AT4G33540:CDS:8.2 | 70 | Chr4: 16132684-16132753 | Arabidopsis thaliana |
AT4G33540:CDS:9.2 | 102 | Chr4: 16132999-16133100 | Arabidopsis thaliana |
AT4G33540:CDS:10.2 | 109 | Chr4: 16133205-16133313 | Arabidopsis thaliana |
AT4G33540:CDS:11.2 | 63 | Chr4: 16133417-16133479 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G33530:exon:1 | 549 | Chr4: 16130060-16130608 | Arabidopsis thaliana |
AT4G33540:exon:1 | 494 | Chr4: 16130593-16131086 | Arabidopsis thaliana |
AT4G33540:exon:15 | 410 | Chr4: 16133560-16133969 | Arabidopsis thaliana |
AT4G33540:exon:2 | 56 | Chr4: 16130669-16130724 | Arabidopsis thaliana |
AT4G33540:exon:3 | 287 | Chr4: 16130800-16131086 | Arabidopsis thaliana |
AT4G33540:exon:4 | 44 | Chr4: 16131183-16131226 | Arabidopsis thaliana |
AT4G33540:exon:5 | 161 | Chr4: 16131373-16131533 | Arabidopsis thaliana |
AT4G33540:exon:6 | 81 | Chr4: 16131613-16131693 | Arabidopsis thaliana |
AT4G33540:exon:7 | 108 | Chr4: 16131947-16132054 | Arabidopsis thaliana |
AT4G33540:exon:8 | 92 | Chr4: 16132280-16132371 | Arabidopsis thaliana |
AT4G33540:exon:9 | 75 | Chr4: 16132525-16132599 | Arabidopsis thaliana |
AT4G33540:exon:10 | 70 | Chr4: 16132684-16132753 | Arabidopsis thaliana |
AT4G33540:exon:11 | 102 | Chr4: 16132999-16133100 | Arabidopsis thaliana |
AT4G33540:exon:12 | 109 | Chr4: 16133205-16133313 | Arabidopsis thaliana |
AT4G33540:exon:13 | 63 | Chr4: 16133417-16133479 | Arabidopsis thaliana |
AT4G33540:exon:14 | 401 | Chr4: 16133560-16133960 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G33530:five_prime_UTR:1 | 255 | Chr4: 16130354-16130608 | Arabidopsis thaliana |
AT4G33540:five_prime_UTR:1 | 289 | Chr4: 16130593-16130881 | Arabidopsis thaliana |
AT4G33540:five_prime_UTR:2 | 56 | Chr4: 16130669-16130724 | Arabidopsis thaliana |
AT4G33540:five_prime_UTR:3 | 82 | Chr4: 16130800-16130881 | Arabidopsis thaliana |
AT4G33540:five_prime_UTR:4 | 161 | Chr4: 16131373-16131533 | Arabidopsis thaliana |
AT4G33540:five_prime_UTR:5 | 24 | Chr4: 16131613-16131636 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G33530 | locus:2134153 | KUP5 | K uptake permease 5 | 4430 | Chr4: 16126179-16130608 | A. thaliana | K+ uptake permease 5;(source:Araport11) | potassium transporter | K+ uptake permease 5 | KUP5 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G33530.1 | 3147 | Chr4: 16126179-16130608 |
AT4G33540.1 | 1648 | Chr4: 16130593-16133969 |
AT4G33540.2 | 1488 | Chr4: 16130669-16133960 |
AT4G33540.3 | 1262 | Chr4: 16131373-16133960 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G33540:three_prime_UTR:2 | 291 | Chr4: 16133679-16133969 | Arabidopsis thaliana |
AT4G33540:three_prime_UTR:1 | 282 | Chr4: 16133679-16133960 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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