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Gene : PME44 A. thaliana

DB identifier  ? AT4G33220 Secondary Identifier  ? locus:2125949
Name  ? pectin methylesterase 44 Brief Description  pectin methylesterase 44
TAIR Computational Description  pectin methylesterase 44;(source:Araport11)
TAIR Curator Summary  Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.
TAIR Short Description  pectin methylesterase 44
TAIR Aliases  ATPME44, PME44, PMEI-PME44

0 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4160  
Location: Chr4:16022269-16026428

Gene models - PME44 AT4G33220

? Gene models

Transcripts: 2  Exons: 10  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PME44_ARATH developmental stage Expressed throughout silique development.
PME44_ARATH function Acts in the modification of cell walls via demethylesterification of cell wall pectin.
A0A1P8B4B4_ARATH PME44_ARATH pathway Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.
PME44_ARATH similarity In the C-terminal section; belongs to the pectinesterase family.
PME44_ARATH similarity In the N-terminal section; belongs to the PMEI family.
PME44_ARATH tissue specificity Expressed in siliques.

2 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
enzyme inhibitor activity  ? ECO  
pectinesterase activity  ? ECO  
biological process
defense response to Gram-negative bacterium  ? ECO  
pectin catabolic process  ? ECO  
cell wall modification  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets