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Gene : RUXF A. thaliana

DB identifier  ? AT4G30220 Secondary Identifier  ? locus:2128956
Name  ? small nuclear ribonucleoprotein F Brief Description  small nuclear ribonucleoprotein F
TAIR Computational Description  small nuclear ribonucleoprotein F;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  small nuclear ribonucleoprotein F
TAIR Aliases  RUXF, SMFA

0 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1531  
Location: Chr4:14802931-14804461 reverse strand

Gene models - RUXF AT4G30220

? Gene models

Transcripts: 2  Exons: 10  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RUXF_ARATH function Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome.
F4JPK5_ARATH RUXF_ARATH similarity Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.

2 Proteins

Function

Gene Ontology

cellular component
catalytic step 2 spliceosome  ? ECO  
U1 snRNP  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
spliceosomal snRNP assembly  ? ECO  
mRNA splicing, via spliceosome  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


4 Homologues

 

Other

9 Data Sets