External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30130:CDS:1 | 1033 | Chr4: 14735401-14736433 | Arabidopsis thaliana |
AT4G30130:CDS:2 | 221 | Chr4: 14736507-14736727 | Arabidopsis thaliana |
AT4G30130:CDS:3 | 224 | Chr4: 14736800-14737023 | Arabidopsis thaliana |
AT4G30130:CDS:5 | 700 | Chr4: 14737094-14737793 | Arabidopsis thaliana |
AT4G30130:CDS:1.1 | 1033 | Chr4: 14735401-14736433 | Arabidopsis thaliana |
AT4G30130:CDS:2.1 | 221 | Chr4: 14736507-14736727 | Arabidopsis thaliana |
AT4G30130:CDS:3.1 | 224 | Chr4: 14736800-14737023 | Arabidopsis thaliana |
AT4G30130:CDS:5.1 | 700 | Chr4: 14737094-14737793 | Arabidopsis thaliana |
AT4G30130:CDS:1.2 | 1033 | Chr4: 14735401-14736433 | Arabidopsis thaliana |
AT4G30130:CDS:2.2 | 221 | Chr4: 14736507-14736727 | Arabidopsis thaliana |
AT4G30130:CDS:4 | 390 | Chr4: 14736800-14737189 | Arabidopsis thaliana |
AT4G30130:CDS:1.3 | 1033 | Chr4: 14735401-14736433 | Arabidopsis thaliana |
AT4G30130:CDS:2.3 | 221 | Chr4: 14736507-14736727 | Arabidopsis thaliana |
AT4G30130:CDS:4.1 | 390 | Chr4: 14736800-14737189 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30130:exon:1 | 455 | Chr4: 14734455-14734909 | Arabidopsis thaliana |
AT4G30130:exon:6 | 224 | Chr4: 14736800-14737023 | Arabidopsis thaliana |
AT4G30130:exon:9 | 1242 | Chr4: 14737094-14738335 | Arabidopsis thaliana |
AT4G30130:exon:2 | 1979 | Chr4: 14734455-14736433 | Arabidopsis thaliana |
AT4G30130:exon:8 | 1536 | Chr4: 14736800-14738335 | Arabidopsis thaliana |
AT4G30130:exon:3 | 170 | Chr4: 14734740-14734909 | Arabidopsis thaliana |
AT4G30130:exon:4 | 1085 | Chr4: 14735349-14736433 | Arabidopsis thaliana |
AT4G30130:exon:5 | 221 | Chr4: 14736507-14736727 | Arabidopsis thaliana |
AT4G30130:exon:7 | 1482 | Chr4: 14736800-14738281 | Arabidopsis thaliana |
AT4G30140:exon:5 | 483 | Chr4: 14738326-14738808 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30130:five_prime_UTR:1 | 455 | Chr4: 14734455-14734909 | Arabidopsis thaliana |
AT4G30130:five_prime_UTR:2 | 946 | Chr4: 14734455-14735400 | Arabidopsis thaliana |
AT4G30130:five_prime_UTR:3 | 170 | Chr4: 14734740-14734909 | Arabidopsis thaliana |
AT4G30130:five_prime_UTR:4 | 52 | Chr4: 14735349-14735400 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G30140 | locus:2126520 | CDEF1 | CUTICLE DESTRUCTING FACTOR 1 | 2417 | Chr4: 14738326-14740742 | A. thaliana | GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) | Member of the GDSL lipase/esterase family of proteins that functions as cutinase. Expressed in pollen and at the zone of lateral root emergence. | GDSL-like Lipase/Acylhydrolase superfamily protein | CDEF1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G30130.1 | 3227 | Chr4: 14734455-14738335 |
AT4G30130.3 | 3666 | Chr4: 14734455-14738335 |
AT4G30130.2 | 3736 | Chr4: 14734455-14738335 |
AT4G30130.4 | 2958 | Chr4: 14734740-14738281 |
AT4G30140.1 | 1518 | Chr4: 14738326-14740742 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G30130:three_prime_UTR:3 | 542 | Chr4: 14737794-14738335 | Arabidopsis thaliana |
AT4G30130:three_prime_UTR:2 | 1146 | Chr4: 14737190-14738335 | Arabidopsis thaliana |
AT4G30130:three_prime_UTR:1 | 1092 | Chr4: 14737190-14738281 | Arabidopsis thaliana |
AT4G30140:three_prime_UTR:1 | 277 | Chr4: 14738326-14738602 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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