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Gene : SDG16 A. thaliana

DB identifier  ? AT4G27910 Secondary Identifier  ? locus:2132912
Name  ? SET domain protein 16 Brief Description  SET domain protein 16
TAIR Computational Description  SET domain protein 16;(source:Araport11)
TAIR Curator Summary  Encodes a SET domain containing protein, putative H3K4 methyltransferase. Involved in bolting/flowering time together with ATX1 and ATX3.
TAIR Short Description  SET domain protein 16
TAIR Aliases  ATX4, SDG16

2 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 6716  
Location: Chr4:13893915-13900630

Gene models - SDG16 AT4G27910

? Gene models

Transcripts: 1  Exons: 23  Introns: 22 

Overlapping Features

? Genome features that overlap coordinates of this Gene

24 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ATX4_ARATH function Histone methyltransferase.
ATX4_ARATH similarity Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.

1 Proteins

Function

Gene Ontology

cellular component
Set1C/COMPASS complex  ? ECO  
Ino80 complex  ? ECO  
molecular function
histone methyltransferase activity  ? ECO  
metal ion binding  ? ECO  
biological process
methylation  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets