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Gene : CSN6B A. thaliana

DB identifier  ? AT4G26430 Secondary Identifier  ? locus:2131493
Name  ? COP9 signalosome subunit 6B Brief Description  COP9 signalosome subunit 6B
TAIR Computational Description  COP9 signalosome subunit 6B;(source:Araport11)
TAIR Curator Summary  one of two genes encoding subunit 6 of COP9 signalosome complex
TAIR Short Description  COP9 signalosome subunit 6B
TAIR Aliases  CSN6B

1 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2638  
Location: Chr4:13354992-13357629

Gene models - CSN6B AT4G26430

? Gene models

Transcripts: 1  Exons: 9  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CSN6B_ARATH function Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Essential for the structural integrity of the CSN holocomplex (PubMed:17307927).
CSN6B_ARATH similarity Belongs to the peptidase M67A family. CSN6 subfamily.

1 Proteins

Function

Gene Ontology

cellular component
COP9 signalosome  ? ECO  
cytoplasm  ? ECO  
molecular function
metallopeptidase activity  ? ECO  
biological process
red, far-red light phototransduction  ? ECO  
COP9 signalosome assembly  ? ECO  
protein deneddylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets