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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G25610:CDS:1 | 145 | Chr4: 13063801-13063945 | Arabidopsis thaliana |
AT4G25610:CDS:2 | 128 | Chr4: 13064168-13064295 | Arabidopsis thaliana |
AT4G25610:CDS:3 | 45 | Chr4: 13064402-13064446 | Arabidopsis thaliana |
AT4G25610:CDS:4 | 54 | Chr4: 13064533-13064586 | Arabidopsis thaliana |
AT4G25610:CDS:5 | 105 | Chr4: 13065064-13065168 | Arabidopsis thaliana |
AT4G25610:CDS:6 | 204 | Chr4: 13065270-13065473 | Arabidopsis thaliana |
AT4G25610:CDS:7 | 86 | Chr4: 13065597-13065682 | Arabidopsis thaliana |
AT4G25610:CDS:8 | 815 | Chr4: 13065774-13066588 | Arabidopsis thaliana |
AT4G25610:CDS:9 | 179 | Chr4: 13066682-13066860 | Arabidopsis thaliana |
AT4G25610:CDS:1.1 | 145 | Chr4: 13063801-13063945 | Arabidopsis thaliana |
AT4G25610:CDS:2.1 | 128 | Chr4: 13064168-13064295 | Arabidopsis thaliana |
AT4G25610:CDS:3.1 | 45 | Chr4: 13064402-13064446 | Arabidopsis thaliana |
AT4G25610:CDS:4.1 | 54 | Chr4: 13064533-13064586 | Arabidopsis thaliana |
AT4G25610:CDS:5.1 | 105 | Chr4: 13065064-13065168 | Arabidopsis thaliana |
AT4G25610:CDS:6.1 | 204 | Chr4: 13065270-13065473 | Arabidopsis thaliana |
AT4G25610:CDS:7.1 | 86 | Chr4: 13065597-13065682 | Arabidopsis thaliana |
AT4G25610:CDS:8.1 | 815 | Chr4: 13065774-13066588 | Arabidopsis thaliana |
AT4G25610:CDS:9.1 | 179 | Chr4: 13066682-13066860 | Arabidopsis thaliana |
AT4G25610:CDS:1.2 | 145 | Chr4: 13063801-13063945 | Arabidopsis thaliana |
AT4G25610:CDS:2.2 | 128 | Chr4: 13064168-13064295 | Arabidopsis thaliana |
AT4G25610:CDS:3.2 | 45 | Chr4: 13064402-13064446 | Arabidopsis thaliana |
AT4G25610:CDS:4.2 | 54 | Chr4: 13064533-13064586 | Arabidopsis thaliana |
AT4G25610:CDS:5.2 | 105 | Chr4: 13065064-13065168 | Arabidopsis thaliana |
AT4G25610:CDS:6.2 | 204 | Chr4: 13065270-13065473 | Arabidopsis thaliana |
AT4G25610:CDS:7.2 | 86 | Chr4: 13065597-13065682 | Arabidopsis thaliana |
AT4G25610:CDS:8.2 | 815 | Chr4: 13065774-13066588 | Arabidopsis thaliana |
AT4G25610:CDS:10 | 71 | Chr4: 13066693-13066763 | Arabidopsis thaliana |
AT4G25610:CDS:11 | 9 | Chr4: 13066819-13066827 | Arabidopsis thaliana |
AT4G25610:CDS:12 | 54 | Chr4: 13066917-13066970 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G25610:exon:1 | 260 | Chr4: 13063227-13063486 | Arabidopsis thaliana |
AT4G25610:exon:13 | 547 | Chr4: 13066682-13067228 | Arabidopsis thaliana |
AT4G25610:exon:3 | 403 | Chr4: 13063264-13063666 | Arabidopsis thaliana |
AT4G25610:exon:12 | 179 | Chr4: 13066682-13066860 | Arabidopsis thaliana |
AT4G25610:exon:2 | 223 | Chr4: 13063264-13063486 | Arabidopsis thaliana |
AT4G25610:exon:4 | 154 | Chr4: 13063792-13063945 | Arabidopsis thaliana |
AT4G25610:exon:5 | 128 | Chr4: 13064168-13064295 | Arabidopsis thaliana |
AT4G25610:exon:6 | 45 | Chr4: 13064402-13064446 | Arabidopsis thaliana |
AT4G25610:exon:7 | 54 | Chr4: 13064533-13064586 | Arabidopsis thaliana |
AT4G25610:exon:8 | 105 | Chr4: 13065064-13065168 | Arabidopsis thaliana |
AT4G25610:exon:9 | 204 | Chr4: 13065270-13065473 | Arabidopsis thaliana |
AT4G25610:exon:10 | 86 | Chr4: 13065597-13065682 | Arabidopsis thaliana |
AT4G25610:exon:11 | 815 | Chr4: 13065774-13066588 | Arabidopsis thaliana |
AT4G25610:exon:14 | 71 | Chr4: 13066693-13066763 | Arabidopsis thaliana |
AT4G25610:exon:15 | 9 | Chr4: 13066819-13066827 | Arabidopsis thaliana |
AT4G25610:exon:16 | 312 | Chr4: 13066917-13067228 | Arabidopsis thaliana |
AT4G25620:exon:2 | 1515 | Chr4: 13067186-13068700 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G25610:five_prime_UTR:1 | 260 | Chr4: 13063227-13063486 | Arabidopsis thaliana |
AT4G25610:five_prime_UTR:3 | 403 | Chr4: 13063264-13063666 | Arabidopsis thaliana |
AT4G25610:five_prime_UTR:2 | 223 | Chr4: 13063264-13063486 | Arabidopsis thaliana |
AT4G25610:five_prime_UTR:4 | 9 | Chr4: 13063792-13063800 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G25620 | locus:2131819 | AT4G25620 | 2577 | Chr4: 13067186-13069762 | A. thaliana | hydroxyproline-rich glycoprotein family protein;(source:Araport11) | NULL | hydroxyproline-rich glycoprotein family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G25610.1 | 2398 | Chr4: 13063227-13067228 |
AT4G25610.3 | 2173 | Chr4: 13063264-13066860 |
AT4G25610.2 | 2206 | Chr4: 13063264-13067228 |
AT4G25620.1 | 2077 | Chr4: 13067186-13069762 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G25610:three_prime_UTR:1 | 368 | Chr4: 13066861-13067228 | Arabidopsis thaliana |
AT4G25610:three_prime_UTR:2 | 258 | Chr4: 13066971-13067228 | Arabidopsis thaliana |
AT4G25620:three_prime_UTR:1 | 261 | Chr4: 13067186-13067446 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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