External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 44, Exons: 19, Five Prime UTRs: 5, mRNAs: 5, Three Prime UTRs: 3, Transposable Elements: 3, Transposon Fragments: 3
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24680:CDS:1 | 29 | Chr4: 12733425-12733453 | Arabidopsis thaliana |
AT4G24680:CDS:2 | 84 | Chr4: 12733952-12734035 | Arabidopsis thaliana |
AT4G24680:CDS:4 | 45 | Chr4: 12734119-12734163 | Arabidopsis thaliana |
AT4G24680:CDS:5 | 370 | Chr4: 12734257-12734626 | Arabidopsis thaliana |
AT4G24680:CDS:6 | 103 | Chr4: 12735165-12735267 | Arabidopsis thaliana |
AT4G24680:CDS:8 | 75 | Chr4: 12735713-12735787 | Arabidopsis thaliana |
AT4G24680:CDS:9 | 1078 | Chr4: 12736012-12737089 | Arabidopsis thaliana |
AT4G24680:CDS:10 | 229 | Chr4: 12737171-12737399 | Arabidopsis thaliana |
AT4G24680:CDS:11 | 2229 | Chr4: 12737509-12739737 | Arabidopsis thaliana |
AT4G24680:CDS:1.1 | 29 | Chr4: 12733425-12733453 | Arabidopsis thaliana |
AT4G24680:CDS:3 | 81 | Chr4: 12733955-12734035 | Arabidopsis thaliana |
AT4G24680:CDS:4.1 | 45 | Chr4: 12734119-12734163 | Arabidopsis thaliana |
AT4G24680:CDS:5.1 | 370 | Chr4: 12734257-12734626 | Arabidopsis thaliana |
AT4G24680:CDS:6.1 | 103 | Chr4: 12735165-12735267 | Arabidopsis thaliana |
AT4G24680:CDS:8.1 | 75 | Chr4: 12735713-12735787 | Arabidopsis thaliana |
AT4G24680:CDS:9.1 | 1078 | Chr4: 12736012-12737089 | Arabidopsis thaliana |
AT4G24680:CDS:10.1 | 229 | Chr4: 12737171-12737399 | Arabidopsis thaliana |
AT4G24680:CDS:11.1 | 2229 | Chr4: 12737509-12739737 | Arabidopsis thaliana |
AT4G24680:CDS:1.2 | 29 | Chr4: 12733425-12733453 | Arabidopsis thaliana |
AT4G24680:CDS:3.1 | 81 | Chr4: 12733955-12734035 | Arabidopsis thaliana |
AT4G24680:CDS:4.2 | 45 | Chr4: 12734119-12734163 | Arabidopsis thaliana |
AT4G24680:CDS:5.2 | 370 | Chr4: 12734257-12734626 | Arabidopsis thaliana |
AT4G24680:CDS:6.2 | 103 | Chr4: 12735165-12735267 | Arabidopsis thaliana |
AT4G24680:CDS:9.2 | 1078 | Chr4: 12736012-12737089 | Arabidopsis thaliana |
AT4G24680:CDS:10.2 | 229 | Chr4: 12737171-12737399 | Arabidopsis thaliana |
AT4G24680:CDS:11.2 | 2229 | Chr4: 12737509-12739737 | Arabidopsis thaliana |
AT4G24680:CDS:1.3 | 29 | Chr4: 12733425-12733453 | Arabidopsis thaliana |
AT4G24680:CDS:2.1 | 84 | Chr4: 12733952-12734035 | Arabidopsis thaliana |
AT4G24680:CDS:4.3 | 45 | Chr4: 12734119-12734163 | Arabidopsis thaliana |
AT4G24680:CDS:5.3 | 370 | Chr4: 12734257-12734626 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24680:exon:1 | 373 | Chr4: 12732494-12732866 | Arabidopsis thaliana |
AT4G24680:exon:2 | 368 | Chr4: 12732499-12732866 | Arabidopsis thaliana |
AT4G24680:exon:19 | 2586 | Chr4: 12737509-12740094 | Arabidopsis thaliana |
AT4G24680:exon:3 | 355 | Chr4: 12732512-12732866 | Arabidopsis thaliana |
AT4G24680:exon:18 | 2562 | Chr4: 12737509-12740070 | Arabidopsis thaliana |
AT4G24680:exon:4 | 125 | Chr4: 12732678-12732802 | Arabidopsis thaliana |
AT4G24680:exon:5 | 69 | Chr4: 12733385-12733453 | Arabidopsis thaliana |
AT4G24680:exon:7 | 84 | Chr4: 12733952-12734035 | Arabidopsis thaliana |
AT4G24680:exon:12 | 117 | Chr4: 12735671-12735787 | Arabidopsis thaliana |
AT4G24680:exon:17 | 2543 | Chr4: 12737509-12740051 | Arabidopsis thaliana |
AT4G24680:exon:6 | 29 | Chr4: 12733425-12733453 | Arabidopsis thaliana |
AT4G24680:exon:8 | 81 | Chr4: 12733955-12734035 | Arabidopsis thaliana |
AT4G24680:exon:9 | 45 | Chr4: 12734119-12734163 | Arabidopsis thaliana |
AT4G24680:exon:10 | 370 | Chr4: 12734257-12734626 | Arabidopsis thaliana |
AT4G24680:exon:11 | 103 | Chr4: 12735165-12735267 | Arabidopsis thaliana |
AT4G24680:exon:13 | 75 | Chr4: 12735713-12735787 | Arabidopsis thaliana |
AT4G24680:exon:14 | 1078 | Chr4: 12736012-12737089 | Arabidopsis thaliana |
AT4G24680:exon:15 | 229 | Chr4: 12737171-12737399 | Arabidopsis thaliana |
AT4G24680:exon:16 | 2229 | Chr4: 12737509-12739737 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24680:five_prime_UTR:1 | 373 | Chr4: 12732494-12732866 | Arabidopsis thaliana |
AT4G24680:five_prime_UTR:2 | 368 | Chr4: 12732499-12732866 | Arabidopsis thaliana |
AT4G24680:five_prime_UTR:3 | 355 | Chr4: 12732512-12732866 | Arabidopsis thaliana |
AT4G24680:five_prime_UTR:4 | 125 | Chr4: 12732678-12732802 | Arabidopsis thaliana |
AT4G24680:five_prime_UTR:5 | 40 | Chr4: 12733385-12733424 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G24680.2 | 4969 | Chr4: 12732494-12740051 |
AT4G24680.3 | 5004 | Chr4: 12732499-12740094 |
AT4G24680.4 | 4892 | Chr4: 12732512-12740070 |
AT4G24680.1 | 4763 | Chr4: 12732678-12740051 |
AT4G24680.5 | 4239 | Chr4: 12733425-12739737 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24680:three_prime_UTR:3 | 357 | Chr4: 12739738-12740094 | Arabidopsis thaliana |
AT4G24680:three_prime_UTR:2 | 333 | Chr4: 12739738-12740070 | Arabidopsis thaliana |
AT4G24680:three_prime_UTR:1 | 314 | Chr4: 12739738-12740051 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE59470 | 39 | Chr4: 12739887-12739925 | Arabidopsis thaliana |
AT4TE59475 | 58 | Chr4: 12739926-12739983 | Arabidopsis thaliana |
AT4TE59480 | 117 | Chr4: 12739984-12740100 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE59470:transposon_fragment:1 | 39 | Chr4: 12739887-12739925 | Arabidopsis thaliana |
AT4TE59475:transposon_fragment:1 | 58 | Chr4: 12739926-12739983 | Arabidopsis thaliana |
AT4TE59480:transposon_fragment:1 | 117 | Chr4: 12739984-12740100 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
MOS1_ARATH | function | Involved in the regulation of the chromatin structure and DNA methylation at the SNC1 locus. Regulates the expression of SNC1 at chromatin level. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
epigenetic regulation of gene expression | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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