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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24100:CDS:3 | 219 | Chr4: 12515223-12515441 | Arabidopsis thaliana |
AT4G24100:CDS:4 | 255 | Chr4: 12515554-12515808 | Arabidopsis thaliana |
AT4G24100:CDS:5 | 125 | Chr4: 12515890-12516014 | Arabidopsis thaliana |
AT4G24100:CDS:6 | 45 | Chr4: 12516105-12516149 | Arabidopsis thaliana |
AT4G24100:CDS:7 | 82 | Chr4: 12516386-12516467 | Arabidopsis thaliana |
AT4G24100:CDS:8 | 69 | Chr4: 12516560-12516628 | Arabidopsis thaliana |
AT4G24100:CDS:9 | 171 | Chr4: 12516747-12516917 | Arabidopsis thaliana |
AT4G24100:CDS:10 | 66 | Chr4: 12516999-12517064 | Arabidopsis thaliana |
AT4G24100:CDS:11 | 69 | Chr4: 12517153-12517221 | Arabidopsis thaliana |
AT4G24100:CDS:12 | 69 | Chr4: 12517327-12517395 | Arabidopsis thaliana |
AT4G24100:CDS:13 | 278 | Chr4: 12517499-12517776 | Arabidopsis thaliana |
AT4G24100:CDS:14 | 122 | Chr4: 12517880-12518001 | Arabidopsis thaliana |
AT4G24100:CDS:15 | 92 | Chr4: 12518093-12518184 | Arabidopsis thaliana |
AT4G24100:CDS:16 | 39 | Chr4: 12518256-12518294 | Arabidopsis thaliana |
AT4G24100:CDS:18 | 108 | Chr4: 12518510-12518617 | Arabidopsis thaliana |
AT4G24100:CDS:19 | 52 | Chr4: 12518707-12518758 | Arabidopsis thaliana |
AT4G24100:CDS:20 | 53 | Chr4: 12518846-12518898 | Arabidopsis thaliana |
AT4G24100:CDS:21 | 65 | Chr4: 12518981-12519045 | Arabidopsis thaliana |
AT4G24100:CDS:22 | 52 | Chr4: 12519147-12519198 | Arabidopsis thaliana |
AT4G24100:CDS:23 | 42 | Chr4: 12519295-12519336 | Arabidopsis thaliana |
AT4G24100:CDS:3.1 | 219 | Chr4: 12515223-12515441 | Arabidopsis thaliana |
AT4G24100:CDS:4.1 | 255 | Chr4: 12515554-12515808 | Arabidopsis thaliana |
AT4G24100:CDS:5.1 | 125 | Chr4: 12515890-12516014 | Arabidopsis thaliana |
AT4G24100:CDS:6.1 | 45 | Chr4: 12516105-12516149 | Arabidopsis thaliana |
AT4G24100:CDS:7.1 | 82 | Chr4: 12516386-12516467 | Arabidopsis thaliana |
AT4G24100:CDS:8.1 | 69 | Chr4: 12516560-12516628 | Arabidopsis thaliana |
AT4G24100:CDS:9.1 | 171 | Chr4: 12516747-12516917 | Arabidopsis thaliana |
AT4G24100:CDS:10.1 | 66 | Chr4: 12516999-12517064 | Arabidopsis thaliana |
AT4G24100:CDS:11.1 | 69 | Chr4: 12517153-12517221 | Arabidopsis thaliana |
AT4G24100:CDS:12.1 | 69 | Chr4: 12517327-12517395 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24100:exon:1 | 543 | Chr4: 12514899-12515441 | Arabidopsis thaliana |
AT4G24100:exon:2 | 112 | Chr4: 12514962-12515073 | Arabidopsis thaliana |
AT4G24100:exon:24 | 547 | Chr4: 12519295-12519841 | Arabidopsis thaliana |
AT4G24100:exon:3 | 92 | Chr4: 12514982-12515073 | Arabidopsis thaliana |
AT4G24100:exon:4 | 244 | Chr4: 12515198-12515441 | Arabidopsis thaliana |
AT4G24100:exon:5 | 255 | Chr4: 12515554-12515808 | Arabidopsis thaliana |
AT4G24100:exon:6 | 125 | Chr4: 12515890-12516014 | Arabidopsis thaliana |
AT4G24100:exon:7 | 45 | Chr4: 12516105-12516149 | Arabidopsis thaliana |
AT4G24100:exon:8 | 82 | Chr4: 12516386-12516467 | Arabidopsis thaliana |
AT4G24100:exon:9 | 69 | Chr4: 12516560-12516628 | Arabidopsis thaliana |
AT4G24100:exon:10 | 171 | Chr4: 12516747-12516917 | Arabidopsis thaliana |
AT4G24100:exon:11 | 66 | Chr4: 12516999-12517064 | Arabidopsis thaliana |
AT4G24100:exon:12 | 69 | Chr4: 12517153-12517221 | Arabidopsis thaliana |
AT4G24100:exon:13 | 69 | Chr4: 12517327-12517395 | Arabidopsis thaliana |
AT4G24100:exon:14 | 278 | Chr4: 12517499-12517776 | Arabidopsis thaliana |
AT4G24100:exon:15 | 122 | Chr4: 12517880-12518001 | Arabidopsis thaliana |
AT4G24100:exon:16 | 92 | Chr4: 12518093-12518184 | Arabidopsis thaliana |
AT4G24100:exon:17 | 39 | Chr4: 12518256-12518294 | Arabidopsis thaliana |
AT4G24100:exon:18 | 57 | Chr4: 12518376-12518432 | Arabidopsis thaliana |
AT4G24100:exon:19 | 108 | Chr4: 12518510-12518617 | Arabidopsis thaliana |
AT4G24100:exon:20 | 52 | Chr4: 12518707-12518758 | Arabidopsis thaliana |
AT4G24100:exon:21 | 53 | Chr4: 12518846-12518898 | Arabidopsis thaliana |
AT4G24100:exon:22 | 65 | Chr4: 12518981-12519045 | Arabidopsis thaliana |
AT4G24100:exon:23 | 52 | Chr4: 12519147-12519198 | Arabidopsis thaliana |
AT4G24100:exon:25 | 584 | Chr4: 12519295-12519878 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24100:five_prime_UTR:1 | 324 | Chr4: 12514899-12515222 | Arabidopsis thaliana |
AT4G24100:five_prime_UTR:2 | 89 | Chr4: 12514962-12515050 | Arabidopsis thaliana |
AT4G24100:five_prime_UTR:3 | 69 | Chr4: 12514982-12515050 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G24100.2 | 2902 | Chr4: 12514899-12519841 |
AT4G24100.1 | 2959 | Chr4: 12514899-12519841 |
AT4G24100.3 | 2715 | Chr4: 12514962-12519841 |
AT4G24100.4 | 2789 | Chr4: 12514982-12519878 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G24100:three_prime_UTR:1 | 505 | Chr4: 12519337-12519841 | Arabidopsis thaliana |
AT4G24100:three_prime_UTR:2 | 542 | Chr4: 12519337-12519878 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A178V4P7_ARATH A0A1P8B4B2_ARATH A0A1P8B4B7_ARATH A0A1P8B4A5_ARATH | similarity | Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
protein kinase activity | ECO |
protein serine/threonine kinase activator activity | ECO |
biological process | |
protein phosphorylation | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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