help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : NRT1.8 A. thaliana

DB identifier  ? AT4G21680 Secondary Identifier  ? locus:2119058
Name  ? NITRATE TRANSPORTER 1.8 Brief Description  NITRATE TRANSPORTER 1.8
TAIR Computational Description  NITRATE TRANSPORTER 1.8;(source:Araport11)
TAIR Curator Summary  Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance.
TAIR Short Description  NITRATE TRANSPORTER 1.8
TAIR Aliases  AtNPF7.2, NPF7.2, NRT1.8

2 Gene Rifs

1 Organism

16 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2453  
Location: Chr4:11517353-11519805 reverse strand

Gene models - NRT1.8 AT4G21680

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features Displayer

5 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PTR47_ARATH function Low-affinity nitrate transporter. Involved in nitrate removal from xylem sap. Not involved in oligopeptides transport.
PTR47_ARATH similarity Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
PTR47_ARATH tissue specificity Expressed in xylem parenchyma cells within the vasculature. Expressed in siliques and flowers. Higher expression in shoots than in roots.

1 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
molecular function
nitrate transmembrane transporter activity  ? ECO  
symporter activity  ? ECO  
biological process
nitrate assimilation  ? ECO  
response to nitrate  ? ECO  
response to cadmium ion  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets